| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5058 |
|---|
| Symbol | |
|---|
| ID | 5673394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6056863 |
|---|
| End bp | 6057849 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641243909 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_001509324 |
|---|
| Protein GI | 158316816 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.114437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0413594 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG CCGACGGCCG GCTCGACACG CCGGACGGGC CGGTGACCGA GCCGGTAGCC
GGGACCGGCG CTCCGGCCGA GCCCGCGGCG GCCGAGTCGG TCGCGGTCGA GCCCGCCGCG
GTCGAGTCGG CTCCGGCGAC TCCGGCCGCT GACGGAGTCG AGCCGGCGCC GAAGGCCGTC
GAGCCGGCGC CGAAGGCCGT CGAGCCGGCG CCGAAGGCCG TCGAGCCAGC TCCGAGCGGC
GTCGAGTCGG CGACGAGCGG GGCCCGGGCC GAGCGGGTCC GTCCGGCGAC CTCGGCCGGG
GCGCCGGCGC ACCGCGGTGC CGCGTCGAAG CCGTTCAACG ACATCACCCA CCGCGTGCTC
AAGCCGCCCG TCCGCCAGGT CCTCAACCAC CTGGTGATGA ACGTGGTCCA CGAGGGCTGG
GAGAACGTCC CGCATGGCGA GCCTCTGATC TTCGCGGGGA ACCACAGCAG CTGGATGGAC
GGGCCGCTCG TCGTCATCGA GGCGCCGCGC ACCGTGCGGT GCCTGGTGAA GTCCGAGATG
TACAAGGGCA TCCTGGGCAG GCTGCTGCTG TTCGTCGGCC AGATCCCGAT CAACCGCGGC
CGCCCGGACC GCGACGCCCT GCACACCGCG CTCGACGAGC TCTCCCGCGG CGGCGCCATC
GGCGTGTTCC CCGAGGGCAC CCGGGGCAGC GGTGAGATGG CCGCCGTCCA GCACGGCATC
GCCTACCTGG CCGTGCACGG GCGTTGCCGT GTCCTTCCCG TGGCCTGCAT CAACACCGGT
GCCGCGCTGC CCCGGGGCGC CAAGTGGCCG CGCCGTTCGG TGAAGGTCCG GGTGGTGTTC
GGCAAGCCGT TCGAGGTGGA GGTGCCGGCG AACCCGCGTT CGCGGCGGGC GCTGGCCGCC
GTGGCGGAGG ACATCCGGGT CCGGCTGGCG GATCATCTGG CGACGGTGCG TGCCGGCGAG
AGCCGGGATT CGTCGGCGGC GGAGTAA
|
|---|
| Protein sequence | MTAADGRLDT PDGPVTEPVA GTGAPAEPAA AESVAVEPAA VESAPATPAA DGVEPAPKAV
EPAPKAVEPA PKAVEPAPSG VESATSGARA ERVRPATSAG APAHRGAASK PFNDITHRVL
KPPVRQVLNH LVMNVVHEGW ENVPHGEPLI FAGNHSSWMD GPLVVIEAPR TVRCLVKSEM
YKGILGRLLL FVGQIPINRG RPDRDALHTA LDELSRGGAI GVFPEGTRGS GEMAAVQHGI
AYLAVHGRCR VLPVACINTG AALPRGAKWP RRSVKVRVVF GKPFEVEVPA NPRSRRALAA
VAEDIRVRLA DHLATVRAGE SRDSSAAE
|
|---|
| |