Gene Franean1_5037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5037 
Symbol 
ID5673373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6037335 
End bp6038189 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID641243888 
Producthypothetical protein 
Protein accessionYP_001509303 
Protein GI158316795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.134748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCATC AGAACCCGCG CTACCCGCCC TCGGTGCCGC TCGTCGTTGA TGCCCTCGGA 
CGGGTGACGC CCGCCGACAT CGACATCACC AAGCCGAGCG TCGCCCGCGT CTACGACGCC
CTGCTCGGAG GCAAGGACAA CTTCCCGGCG GACCGGGCCA TCGCCGACAC GCTGATGGCG
CTCACCCCGA ACGGGGCGCA GGTGCCGCTC TACAACCGGG CGGTGCTCGG CCGGGGCGTG
CGCTCCATGG CGAACGCGGG TATCCGACAG TTCGTCGACC TCGGGTCCGG GCTGCCGACG
GTGCAGAACA CCCATCAGGT GGCGCAGGCG ATCGCCCCGG AGTCCACGGT GGTCTACGTC
GACAACGATC CGATCGTCCT GGCGCACGGG CGGGCGCTGC TGGCGGAGAA CGACCGGACC
ACGGTCATCA CTGCCGACAT GCGGGAGCCG AATTCCGTGC TCGCCAATCC GGATCTTCTG
ACTTTGATCG ATTTCGACCA GCCGGTCGGA CTTCTGCTGG TGGCGATCAT CCACCACCTC
AACGATAACG AGGACCCGGG TGGCCTGGTC CGGCGGTACG TCGACGCCCT GCCCTCGGGC
AGCTACGTCT TCCTCACCCA CTTCGTCGAC GGCGGGGCCG AGACCGCGGA GATCGAGAAG
GTCATGCTCG GAGACCTCGG CACGGGCCGC TTCCGCTCCT TCGAGGAGAT CAGAACGTAT
TTCGACGGTT TGGAGCTGCT GGAGCCGGGT GTCGTGTACA ACCCGTTGTG GCGGCCCGAC
CCCGGCGACG ACGTGCCGGA CCCGCTCACC CTTGCCGCTA AGATCATCGG CGCGGGGATG
GGACGCAAGG TCTGA
 
Protein sequence
MSHQNPRYPP SVPLVVDALG RVTPADIDIT KPSVARVYDA LLGGKDNFPA DRAIADTLMA 
LTPNGAQVPL YNRAVLGRGV RSMANAGIRQ FVDLGSGLPT VQNTHQVAQA IAPESTVVYV
DNDPIVLAHG RALLAENDRT TVITADMREP NSVLANPDLL TLIDFDQPVG LLLVAIIHHL
NDNEDPGGLV RRYVDALPSG SYVFLTHFVD GGAETAEIEK VMLGDLGTGR FRSFEEIRTY
FDGLELLEPG VVYNPLWRPD PGDDVPDPLT LAAKIIGAGM GRKV