| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5004 |
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| Symbol | |
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| ID | 5673343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6001097 |
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| End bp | 6002140 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243858 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001509274 |
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| Protein GI | 158316766 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.549544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCCGTC GTGGAATTGC CTGGCTGCCC GAGGACTGGG AGCAGTTCGT CAAGGGGCGC
CAGCGCCCCT CGAACGCCCG ATCGGGTACG GGCGCCCGGC GGCGCACCTC CCAGCCGCCT
CGTCGGGCGG CGACGATCGC CGCGTTCACC ACGGGCACGC TCGCGGCCTC GACGGCGGCC
TTCGCCGCCA CGGTGCCGGC CACCCCGGAC GGCACCGCGT CCATCGACCC GGGCGCGACC
CAGACGGCCT CCGTGCTGCC GGGCCAGGGC GGGACGGACG CGCCGGACGC CGCGGCCGCC
GCCGCGCCGC TGGCGGGGGC GATCGCGTCC TCCGAGCCGA TGTTCACCAA GGTCTCGCTG
ACGGCGGACA ACACCACGGT CGCGCCGAAC GCCCCGGTGG TGCTGACCGT CCGGGCCAAT
GAGGCTGGCG GCGCTCCGCT GGCCAACCAG CGGGTCCGCA TCGTCGTGGT GAACGGGCCG
AAGTGGCAGA CCTCGACGGC GCTGACGACC GACACCAACG GTCAGGCCCA GATCACCGCG
CGGCTGCTGA CCACCACGAC GATCACCGCC GTCTTCGACG GCACGAGCGC GCTGCGGCCC
TCGCTGGCCG GCGCGGCCAC GATCACGATC AAGGCGCCGA CGGCGCCCCG CCCGGCCGTC
AGCCAGGCCA TCCCGTCGGT GATCCCGGGC AGCTCGATCG GGGAGAAGGC CGTCTACCTG
GCCTCGCTAC AGAAGGGCAA GCCGTACGTG TGGGGGGCGG AGGGCCCCTA CTCGTTCGAC
TGCTCCGGCC TGGTCCAGTA CGTCTTCAAG CAGCTCGGAC GTTCCCTGCC GCGCACCGCG
CAGGGCCAGT ACAACGTGTC GACCCACGTG CCGCAGTCCG GTAAGCGCCC CGGCGACCTG
ATCTTCTACG GGACCGAGGG CAACATCTAC CACGTGGGCA TCTACGCCGG GAACGGCTAC
ATGTGGGCCG CGCCGCAGAC CGGCGGTGTG GTGTCGCTCC GCCCGATCTA CAGCTCCACC
TACAAGGTCG GCCGGATCAT GTGA
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| Protein sequence | MPRRGIAWLP EDWEQFVKGR QRPSNARSGT GARRRTSQPP RRAATIAAFT TGTLAASTAA
FAATVPATPD GTASIDPGAT QTASVLPGQG GTDAPDAAAA AAPLAGAIAS SEPMFTKVSL
TADNTTVAPN APVVLTVRAN EAGGAPLANQ RVRIVVVNGP KWQTSTALTT DTNGQAQITA
RLLTTTTITA VFDGTSALRP SLAGAATITI KAPTAPRPAV SQAIPSVIPG SSIGEKAVYL
ASLQKGKPYV WGAEGPYSFD CSGLVQYVFK QLGRSLPRTA QGQYNVSTHV PQSGKRPGDL
IFYGTEGNIY HVGIYAGNGY MWAAPQTGGV VSLRPIYSST YKVGRIM
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