| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5002 |
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| Symbol | |
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| ID | 5673341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5997720 |
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| End bp | 6000251 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243856 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001509272 |
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| Protein GI | 158316764 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGAGCCG TCGTGATGGC GGGCGGCGAG GGCACCCGGC TGCGGCCGCT GACCGCGAAC
CTGCCGAAGC CCCTGCTGCC GGTCGTCAAC CGCCCGATCA TGGAGCACGT CCTGCGGCTG
CTCAAGCGGC ACGGTTTCGA CGAGACCGTG GTGACGGTCC AGTTCCTCGC AGCGATGATC
CGCAACTACT TCGGCTCCGG TGACGAGCTG GGCATGCACC TGTCCTACGC GACGGAGACC
ACGCCGCTGG GCACCGCGGG CAGCGTGAAG AACGCCGAGG ACGCGCTGCG CCACGAGGAG
TTCCTGGTCA TCAGCGGTGA CGCCCTGACC GACATCGACC TGACCGACCT CGTCGCCTAC
CACCGGGCGC AGGGCGCGCT GGTCACCGTC GCGCTCAAGT CGGTGCCCGA CCCGCTCGAG
TTCGGCATCG TGATCACCGG CGAGGACGGG CGGATCTCCC GGTTCCTGGA GAAGCCGACC
TGGGGCCAGG TGTTCTCCGA CACCGTCAAC ACCGGCATCT ACGTGATGGA GCCGGAGGTC
CTCGACCACG TCCCGGCCGG CGAGGCGGTC GACTGGTCCG GGGATGTCTT CCCCCGGCTG
GTCGCCGCCG GGGCGCCGGT GTTCGGCTAC GTCGCCGGCG GCTACTGGGA GGACGTCGGC
ACCATCGCCA GCTTCCAGCG CGCGCAGGCG GACGTGCTGA ACCGGCAGGT GGACGTCTCG
ATCGGCGGGT TCGAGGTCTC CCCGGGGGTC TGGATCGGCG AGGACGCCGA CGTCCACCCC
GACGCGATCC TCAAGGGCCC GCTGGTCGTC GGCGACTACA GCAAGGTCGA GGCCGGCGCC
GAGCTGCGCG AGTTCACCGT GCTCGGCAGC AACGTGGTGG TGAAGCGGGG GGCCTTCCTG
CACCGGGTGG TCGTCCAGGA CAACGCGCTC ATCGGCCCGC GGACGAACCT GCGCGGCTGC
GTGATCGGCA AGAGCACGGA CGTGCTGCGG GCCGCGCGCA TAGAGGAGGG CGCGGTCATC
GGCGACGAGT GCGTCATCCA GGAGGAGGCG TTCGTCTCCC ATGACGTCAA GGTCTACCCG
TTCAAGACCA TCGAGGCCGG GGCGGTCGTC AACACCAGCG TCATCTGGGA GTCGCGCGGG
CAGCGGTCGC TGTTCGGCCC ACGCGGGGTC TCCGGACTGG TCAACGCGGA GATCACCCCG
GAGCTGGTGG TCCGCCTGGC CAGCGCGTAC GCGACGACGC TGAAGAAGGG CTCCACCGTC
ACCACCGCGC GGGACGGCTC GCGCGCGGCC CGGGCCCTCA AACGGGCCGT GATCAGCGCC
CTCACCGCCG GCGCGATCAA TGTCCGTGAC CTGGAGGTGG CCCCGCTGCC GGTCGCGCGC
TTCGACGTCC GCACCTCGGA CGCGGCCGGC GGGATCATGC TGCGCTCCAA GCCGGGCGAC
GCCGAGCGCA TCGACATCGT CTTCCTCGAC GCCGACGGCG ACGATCTCTC CCCGGCCGCG
CAGCGCAAGC TCGACCGCGT GTTCACCCGG CAGGAGTTCC GCCGCGCGTT CCCCGGCGAG
ATCGGCGACC TGCGCTTCCC GGCGCGCACG GCCGACGTCT ACACCCAGGA CCTGCTCGAC
CGGGTGGACA CCAGCGGGCT CGCCGAGGCG GATCTCAAGG TGGTCGTCGA CCCGTCCGGG
GGAGCGGCGT CGCTGCTGCT GCCCACCCTG CTCGGCCGGC TCGGCGTCGA CGTGCTGACC
GTCAACGGCC GGCTGGACGA GACCTACCCC GAGCCCGGCG CCGAGCAGGA GCGCAGGGCT
CTGGACCGGC TGGGCGCGCT CGTGGCGAGC TCACGCGCCG CGTTCGGGGT CCGCTTCGAC
CACATCGGCG AGCGGATCAC CATCGTCGAC GAGCGCGGCG ACCTCATCAG CGACGAGCGG
GCCCTGCTGG TCATGCTCGA CCTCGTCGCG GCGGAGAACC GCGGCGCCCA GGCGGCGGTG
CCCGTCACCA CCACCCGGGT CGCCGACCAG GTGGGGCGCT TCCACGGCCT GACCGTGCGG
CGGATGTCGA TGTCCGGCTC CGAGCTCTCC CGGGTCGTGC AGGCCGAGCC GATCGTCTTC
GCCGCCGACG GGCGGGGCGG ATTCGTCGTG CCGGAGTTCG CTCCCGTGAT CGACGGCCTG
GCGGCGTTCG TCCGGCTGGT CGCGCTGGTC GCCCGGACCA GGCTGACGCT CAGCGCGATA
GACGCGCGGA TCCCTCCGGT CGCGATGGTG CGGGCGTCGG TGCCCACACC GTGGGCGGAG
AAGGGCACTG TCATGCGCCG CGTCGTCGAG TCGGTGGACG TCGACTCGGG CGACCAGGTC
GACACCACCG ACGGGGTGCG CGTCGTCGGC CCGGACGGAT CCTGGGTGCT GGTGCTGCCC
GACCCGTCCG AGGCGGTGAC CCATCTGTGG GCCGAGGCGG CGGATCTGGG CGGCGCGCAG
AAGCTGGTGC GCCGGTGGAG CGCCGTCGTG GAGACGGTGC CGCCGGAGCA GGCTCCCGTC
ACCCGTTCAT GA
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| Protein sequence | MRAVVMAGGE GTRLRPLTAN LPKPLLPVVN RPIMEHVLRL LKRHGFDETV VTVQFLAAMI
RNYFGSGDEL GMHLSYATET TPLGTAGSVK NAEDALRHEE FLVISGDALT DIDLTDLVAY
HRAQGALVTV ALKSVPDPLE FGIVITGEDG RISRFLEKPT WGQVFSDTVN TGIYVMEPEV
LDHVPAGEAV DWSGDVFPRL VAAGAPVFGY VAGGYWEDVG TIASFQRAQA DVLNRQVDVS
IGGFEVSPGV WIGEDADVHP DAILKGPLVV GDYSKVEAGA ELREFTVLGS NVVVKRGAFL
HRVVVQDNAL IGPRTNLRGC VIGKSTDVLR AARIEEGAVI GDECVIQEEA FVSHDVKVYP
FKTIEAGAVV NTSVIWESRG QRSLFGPRGV SGLVNAEITP ELVVRLASAY ATTLKKGSTV
TTARDGSRAA RALKRAVISA LTAGAINVRD LEVAPLPVAR FDVRTSDAAG GIMLRSKPGD
AERIDIVFLD ADGDDLSPAA QRKLDRVFTR QEFRRAFPGE IGDLRFPART ADVYTQDLLD
RVDTSGLAEA DLKVVVDPSG GAASLLLPTL LGRLGVDVLT VNGRLDETYP EPGAEQERRA
LDRLGALVAS SRAAFGVRFD HIGERITIVD ERGDLISDER ALLVMLDLVA AENRGAQAAV
PVTTTRVADQ VGRFHGLTVR RMSMSGSELS RVVQAEPIVF AADGRGGFVV PEFAPVIDGL
AAFVRLVALV ARTRLTLSAI DARIPPVAMV RASVPTPWAE KGTVMRRVVE SVDVDSGDQV
DTTDGVRVVG PDGSWVLVLP DPSEAVTHLW AEAADLGGAQ KLVRRWSAVV ETVPPEQAPV
TRS
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