Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5001 |
Symbol | |
ID | 5673340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5996750 |
End bp | 5997643 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 641243855 |
Product | hypothetical protein |
Protein accession | YP_001509271 |
Protein GI | 158316763 |
COG category | [S] Function unknown |
COG ID | [COG3879] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGGAC GGACACGGCT GACCACGCGC GCGAGCGGGG GGAGCCCGCT GGCGGGCGGC GTCGCGGCGA CGGTGCTCGA GCGGATCGTG GCCGACGCGC TCGAGCCCGC CTACGCGCGG CACTCCGACG TCGCGCGCGG AGCCGGTCGG CGCGGTGGCG GGTGGGTCAG GCGGCTGCTG CTGCCCCTGA CGCTGCTTCT CGCGGGCCTG CTTGTCGCCG TGAGCGTGCG CCAGGCGGTC GATGACGCGC CGTCCCGGGA GCGGCTGCGG GCGCGACTGA GCGCCGAGTA CGAGGCCCGC TCCACCCACC GGGACGGCCT CGCCTCCTCG GTGGCCGTGC TCCGCTCCGC CACTGAGGGC CTGGTGAACC GGCGCCGGAC GGCCGACGGG CTCTGGGCGG TCGCGAACGC CGAGATCGAC GCGCTCGCGG CGCCGGCCGG CCTGGCGCCG GCGCGCGGCC CCGGCGCGCG GGTGACCCTC GTCGACCCGT CGGCCGGGCC GCCCGCCGAC GCGGGCAACC CGCGGCCGAC GGCACAGGGC CCCGACGGCC GGCTCGCCGA CCACGACCTG GCCGACATGG TGAACGCGCT GTGGGCCACC GGTGCCGAGG CCATCGCCGT GAACGGGGTC CGGCTGACCG CGCTGAGCGC GGTGCGCGCC GCGGGCGACA CGATCCTGGT CGGCCTGAGC CCGGTCGCGG CACCCTACGT GGTCGACGTC GTCGGGGACC CTGACACGAT CGTTCCGGGG GTGACCGCCG CGGCGGTCAC GCTGCGCCTG CGCACCCGGA TGGGCGCGCC CCCGAACGCC GTGACCGTCG CCCGCCTGGA CGACGTCACC GTGCCGGCGG CCCCCAGCCC GAGCCTCCGA TATGCCCGAG GGAGCGGATC TTGA
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Protein sequence | MHGRTRLTTR ASGGSPLAGG VAATVLERIV ADALEPAYAR HSDVARGAGR RGGGWVRRLL LPLTLLLAGL LVAVSVRQAV DDAPSRERLR ARLSAEYEAR STHRDGLASS VAVLRSATEG LVNRRRTADG LWAVANAEID ALAAPAGLAP ARGPGARVTL VDPSAGPPAD AGNPRPTAQG PDGRLADHDL ADMVNALWAT GAEAIAVNGV RLTALSAVRA AGDTILVGLS PVAAPYVVDV VGDPDTIVPG VTAAAVTLRL RTRMGAPPNA VTVARLDDVT VPAAPSPSLR YARGSGS
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