Gene Franean1_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5000 
Symbol 
ID5673339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5996403 
End bp5996753 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content72% 
IMG OID641243854 
Producthypothetical protein 
Protein accessionYP_001509270 
Protein GI158316762 
COG category[S] Function unknown 
COG ID[COG3856] Uncharacterized conserved protein (small basic protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCGTG AAGGTGCGAT CACCGGCCTG CTCGCGCTCG TTGTCGGCGT CGTCGCCGGG 
CTCCTCGTCG CGCCGAAGCC CCCGACCTGG CTGGACCCGT ACCTGCCGGT GGCGGTGGTC
GCCGCGGTGG ACGCGGCGGT CGGGGGCCTG CGCGCGGCGC TGGAGCGGGT CTTCTCCGAC
CGTGTCTTCG TCGTGTCCTT CCTGTCGAAC GTGCTGCTGG CCGTGGCGCT CGTCGCGCTG
GGCGACGCGC TCGGCGTCGG CGGCGCGATG TCGACCGCGA TGGTCGTCGT CCTCGGCATC
AGGATCTTCA CCAACGCGAG CGCGGTCCGC CGATCGCTGC TGAAACTGTG A
 
Protein sequence
MTREGAITGL LALVVGVVAG LLVAPKPPTW LDPYLPVAVV AAVDAAVGGL RAALERVFSD 
RVFVVSFLSN VLLAVALVAL GDALGVGGAM STAMVVVLGI RIFTNASAVR RSLLKL