Gene Franean1_4984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4984 
Symbol 
ID5673323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5980022 
End bp5980573 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content75% 
IMG OID641243838 
Productputative phosphohistidine phosphatase, SixA 
Protein accessionYP_001509254 
Protein GI158316746 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID[TIGR00249] phosphohistidine phosphatase SixA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0277019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCCCA CCTCGCGCCT ACTGCTGCTG CGGCACGCCA AGTCCGACTG GACGTCCGAC 
CCGGAGGTCC GTGACCAGGA CCGCCCGCTC TCCCAGAAGG GGCGCCGCGG TATCGCGCTG
GTCGCCGACT ACCTGGCCGC GTCCGGTCTC GAGCCCGACC TCGTGCTCTG CTCGTCCGCC
GTGCGCACCC GCGAGACGGT GGAGCACCTG GCCGACGCGC TGCCCAGCGA CGTCCCGGTG
CTGGTGGAGG ACCGGCTCTA CCTGGCCGAG GCGAACGACC TGCTGGCCCG GCTGCGGGAG
ATCGACGACG GTGTCCCGAC CGTGCTGCTG GTCGGCCACA ACCCGGGCAT CCACACGCTC
GCGGTGGGGC TGCTCGCCCC GTCCGAGCGG CACCGCGTGC CGACGTTCCC GACGGCGGCG
CTGGCCGTGC ACGACCCCTC GGTGCCGCGC TGGGCCGAGC TCGGCCCGGC CACGACGAGG
CTGCTCGACT TCGTCACCCC GCGCTCCCTG CGGACGTCCG CCGGCACCCC CGGGGACCCG
GCGGACGACT GA
 
Protein sequence
MRPTSRLLLL RHAKSDWTSD PEVRDQDRPL SQKGRRGIAL VADYLAASGL EPDLVLCSSA 
VRTRETVEHL ADALPSDVPV LVEDRLYLAE ANDLLARLRE IDDGVPTVLL VGHNPGIHTL
AVGLLAPSER HRVPTFPTAA LAVHDPSVPR WAELGPATTR LLDFVTPRSL RTSAGTPGDP
ADD