Gene Franean1_4983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4983 
Symbol 
ID5673322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5979383 
End bp5979751 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content75% 
IMG OID641243837 
Producttranscription factor WhiB 
Protein accessionYP_001509253 
Protein GI158316745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00770439 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.74294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG GCGTACCCGT ACTTCCCGGT CGCGACCTCC CGCCGCAGCC GTTCGGCGAG 
GGCTGGCCCG TCTACTGGCG CCAGGACGCC GCGTGCCGCG ACGGCGACCC GGACGCCTTC
TTCCCGCCGG ACGGGCGCAA CACCAAAGCA CGCGCGGCCG CCGAGACCCG GGCCCGCAAG
ATCTGTTCCG ACTGCCCGGT GCAGCGGGCC TGCCTGGCCA CCGCGATCTT CCGCCAGGAG
GAGCACGGGG TCTGGGGCGG GCTGACCTCG GACCAACGCT CCGCCCTCGT CCCGCGGGGC
CGGCTCAGCG CGGACGACGC GCTCGCCGCC GCGGACCGCC TCCTGCTTTC CATCGCCGTC
GCGAGCTGA
 
Protein sequence
MSAGVPVLPG RDLPPQPFGE GWPVYWRQDA ACRDGDPDAF FPPDGRNTKA RAAAETRARK 
ICSDCPVQRA CLATAIFRQE EHGVWGGLTS DQRSALVPRG RLSADDALAA ADRLLLSIAV
AS