Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4983 |
Symbol | |
ID | 5673322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5979383 |
End bp | 5979751 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641243837 |
Product | transcription factor WhiB |
Protein accession | YP_001509253 |
Protein GI | 158316745 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00770439 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.74294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCCG GCGTACCCGT ACTTCCCGGT CGCGACCTCC CGCCGCAGCC GTTCGGCGAG GGCTGGCCCG TCTACTGGCG CCAGGACGCC GCGTGCCGCG ACGGCGACCC GGACGCCTTC TTCCCGCCGG ACGGGCGCAA CACCAAAGCA CGCGCGGCCG CCGAGACCCG GGCCCGCAAG ATCTGTTCCG ACTGCCCGGT GCAGCGGGCC TGCCTGGCCA CCGCGATCTT CCGCCAGGAG GAGCACGGGG TCTGGGGCGG GCTGACCTCG GACCAACGCT CCGCCCTCGT CCCGCGGGGC CGGCTCAGCG CGGACGACGC GCTCGCCGCC GCGGACCGCC TCCTGCTTTC CATCGCCGTC GCGAGCTGA
|
Protein sequence | MSAGVPVLPG RDLPPQPFGE GWPVYWRQDA ACRDGDPDAF FPPDGRNTKA RAAAETRARK ICSDCPVQRA CLATAIFRQE EHGVWGGLTS DQRSALVPRG RLSADDALAA ADRLLLSIAV AS
|
| |