| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4977 |
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| Symbol | |
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| ID | 5673316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5971991 |
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| End bp | 5972860 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641243831 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001509247 |
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| Protein GI | 158316739 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.524569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCATTC CGATTCACGA CATCAATCCG CTGCGGCGCA GGCCGGTCGT GACCTGGCTG
CTGATCGCCG CCAACGTCGT GATCTTCGTG TTCTTCACGC CGGTGGTCAG CTCGGTTGCC
GGGGTACAGA CCTCACGGAC GCAGAACGCG TGCGAGCAGC AGCGCTTCTT CCAGGAATGG
GGTGCGATCC CGAAGGAGCT GCTGTCGAAC GAGCAGCTGT CGGTGGCGAA CTCCGGCCGG
CTCGCGGTGG ACGCGCGGGG CCGGGTGGGC TGCCTGCAGG AGTCACCGCC GACGTTCGAC
AAGTCGCCAG CCCTGTCGGT GCTCAGCGCG ATGTTCCTGC ACGGCAGCTG GCTGCACCTG
CTCGGCAACA TGCTGTTCCT CGGGGTGTTC GGCAACAACA TCGAGGATCG GATGGGCCGG
CTGCTGTACC TGCTCTTCTA TCTGACCTGC GGTTTCGCGG CGGCGTACGG CTTCGCCGCG
TTCGAGGGGA ACACCACCGA CACGCTGATC GGCGCGTCCG GGGCGGTGGC CGGGGTGCTC
GGCGCGTACC TCGTCGTGTT TCCCCGCGCC CGGGTCATCG GGCTGGTATC GGTGTTGTTC
TTTCTGCCGT TCTGGCTGCC GGCGTGGATC GTGCTCGGGT TCTGGTTCGC GCTGCAGTAC
GTGTACTTCA CCGGCTTCGG GGTGGCCGAC GGTGGGAGCG TCGCCTACGG CGCGCACGTG
GTCGGGTTCG TCGTGGGGGC CGTGCTGGTC GCGCCCTTCG TCCAACGGCT GCGCGCGGCC
GGGCCCGATC CGCGCCGGGC GGTCCAGCAT CGCTGGGTGC GTGAGCCACC CGGATTCGGC
CAGCAGCGGC GGCCCCGTCA CCGCGGCTGA
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| Protein sequence | MVIPIHDINP LRRRPVVTWL LIAANVVIFV FFTPVVSSVA GVQTSRTQNA CEQQRFFQEW
GAIPKELLSN EQLSVANSGR LAVDARGRVG CLQESPPTFD KSPALSVLSA MFLHGSWLHL
LGNMLFLGVF GNNIEDRMGR LLYLLFYLTC GFAAAYGFAA FEGNTTDTLI GASGAVAGVL
GAYLVVFPRA RVIGLVSVLF FLPFWLPAWI VLGFWFALQY VYFTGFGVAD GGSVAYGAHV
VGFVVGAVLV APFVQRLRAA GPDPRRAVQH RWVREPPGFG QQRRPRHRG
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