| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4976 |
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| Symbol | |
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| ID | 5673315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5970385 |
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| End bp | 5971629 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243830 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001509246 |
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| Protein GI | 158316738 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.554715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGTTCG TCCTCGCGAC GTACGCCTTC GTCGTCACCA TGCTCGGCAC CACCCTGCCG
ACGCCGATCT ACCCGCTCTA CCGTGAGCGG TTCGGTTTCT CCCAGCTCAT GGTCACCGTG
GTCTTCGCGA CCTACGCCGT CGGCGTGATC GCGGCCCTGC TGCTGTTCGG ACGGCTCTCC
GACCAGGTCG GCCGCCGCCA TGCGCTGCTG CCCGGCCTGC TCGCCTCGGC CGCGAGCGCC
GCGGTCTTCC TGCTGGCGGA CAACGTCGGC GTCCTGCTCG TCGGTCGGGT GCTCTCCGGC
CTGTCCGCGG GCGTGTTCAC CGGGACGGCC ACCGCGACGC TCCTCGACCT CGCGCCACCG
CACCGGCGGG GACGCGCCAC CCTGGTCGCC ACCATCGCCA ACATGGGCGG TCTGGGCTGT
GGCCCGCTGC TGGCCGGCCT GCTCTCCCAG TACGCCCCCA ACCCGCTGCG GCTGACCTTC
GTGGTCGATC TGGCGCTGCT CGTCCCGGCC GCGGTCGGCA TCTGGCTGAT GCCCGAGACC
GTCGAGGTGA CGGGCCCGGC CCGGCTGCGC CCACAGCGCC CCCGGGTGCC ACCGAGCGCC
CGGTCGGTCT TCGTCGGCGT CGCGCTGGCT GCTTTCGCCG GATTCGCCGT CCTCGGCCTC
TACACGGCCG TGGCACCCGC CTTCCTGGGC GCCGTGCTGG ATCCGCCGAA CCGGGCCATC
ACCGGACTGG TCGTCTTCGC GGTCTTCGCC TCCTCCGCCT GCGGCCAGGC CTCGCTCGAC
GTCGTCACCC GCCGGCTCGC CGCACCAGGA CGTCCGCCCG AGCGCATCGG GCTCACCGTC
GGCTGCGCCG GGCTGGTGCT GGGCATGGGC GTGCTCGCGC TGGGCCTGGC GACGTCGTCG
GTCGCCGGCC TCGTGATCGG TGGCGTGATC TCCGGAGCGT CCCAGGGGAT CGCCTTCCGG
GCCGGCCTCG CCGCCGTGAA CACAGCCTCC CCGGCCGACC GCCGCGCCGA GGCCGCCTCC
GCCTTCTTCG TCGTCGCCTA CGTGGCGCTC TCACTGCCGG TCGTCGGGGT CGGCCTGCTC
GTCGAGCTGA CGAGCCTGAC CACCGCCGGC CTGGTGTTCG CCGCGATCGT GGCCGTCCTG
GCGATCGTCG TCCTGGCCCT GTTGCGCACG GGCGCCGGCA CTGCAGCTGC TGGTGGTGCC
GCCGCTACCG ACGGGGCGGT CCCGGTACCG GCGCGGGACC GGTAA
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| Protein sequence | MGFVLATYAF VVTMLGTTLP TPIYPLYRER FGFSQLMVTV VFATYAVGVI AALLLFGRLS
DQVGRRHALL PGLLASAASA AVFLLADNVG VLLVGRVLSG LSAGVFTGTA TATLLDLAPP
HRRGRATLVA TIANMGGLGC GPLLAGLLSQ YAPNPLRLTF VVDLALLVPA AVGIWLMPET
VEVTGPARLR PQRPRVPPSA RSVFVGVALA AFAGFAVLGL YTAVAPAFLG AVLDPPNRAI
TGLVVFAVFA SSACGQASLD VVTRRLAAPG RPPERIGLTV GCAGLVLGMG VLALGLATSS
VAGLVIGGVI SGASQGIAFR AGLAAVNTAS PADRRAEAAS AFFVVAYVAL SLPVVGVGLL
VELTSLTTAG LVFAAIVAVL AIVVLALLRT GAGTAAAGGA AATDGAVPVP ARDR
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