| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4968 |
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| Symbol | |
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| ID | 5673307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5962319 |
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| End bp | 5963662 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243822 |
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| Product | diguanylate phosphodiesterase with GAF sensor(s) |
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| Protein accession | YP_001509238 |
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| Protein GI | 158316730 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.49831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.572162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGA CGGCCCGGTA TCCGTGCGAC CTGTCCGCCG GCTCGCCGAC GGTCGACCCG
CTCCACACCG AGCAGTGCGG CGCGGTCGTG GCCGGGCTGA TGTCGGTCGC CCGGCACCGG
CTCGGGATGG AGCTGGCCGT CATCACCCGC CGGGTGGCCG ACGTCCTGGT CGTCGAGCAC
TATGACGGCG ACATCGAGTC GTTCGGCATC ACCGTGGGCA CGACCGCCGA CTACGAGCGG
ACGCGGGCCG CGCTCGAGGG ACGTCTGCCG CAGGTCGTCC GCTACGCCGG GCAGGACGGG
CGCACCGCGG ACCCGGCGCT GGCCCGCCGG GTCGGCATCG GCAGCTATGT CGTGGCCCCG
GTGCTGCTGC CCGACGGCTC CGTGTACGGC TCGCTGGCGT GCATGAGCCA CAACCCGGAC
CCGGCGCTGC GCGACCGCGA CGCGTCGTTC CTGGCCCTGA TCGCCGGCGC GCTGTCGAAC
TGCGTCTCCG ACCACCGTGG CGACTGGCGC GAGCGGGACC GCGTCTGGCG CCGGATCAGC
CGGCTGATCG ACGACGGCGG GCCGGCGATG GTCTTCCAGC CGATCTACGA CCGGGCGACG
CTCGACATCG CCGGTGTGGA GGCCCTCTCC CGCTGCCCCG GCACCGGCAC CGCCGGCTCG
GACGAGTCGT CCCCGCAGCG GTGGTTCGCC GACGCGGCGT CCGTCGGGCT GGGAGTCGAG
CTGGAGGTCG CGGCGATCCG CAACGCGCTC GCGGCGCTGC CATGGCTGCC CGCCGGACTG
CCGCTGTCCG TGAACGCGTC ACCGGCCGCC ATCGTGTCGG GCGAGCTGAT CGACCTGCTC
GCCACCATCC CGCCGGAGCG GGTGATCATC GAGGTGACCG AACACAGCCG CATCGACGAC
TACCCGACGG TCATGCTCGC GCTCGACGCC CTGCGCAGCC GCGGGGTACG CGCCGCGCTC
GACGACGTGG GCGCCGGCTA CGCGGGCCTG CACCAGCTGC TACAGATCAG GCCGGACATC
ATCAAGATAG ACCAGAGCAT CATCCGGAAG ATCGCGGAGG ACGCCCCGGC CTGCCGGGCG
CTGGCCACCG CGCTCGTGTG TTTCGCGGAG GACATCGGCG CGACCGTGCT CGCCGAGGGC
GTGGAGACGT CCAGGGAGCT GGAGGTCCTC GGCGAGGCCG GGGTCCATCA GGTCCAGGGC
TTCCTGCTGG CCCGCCCGGG CATGCTCGCG TCCGGCCCAC CGCCTGGGAC GAGCGGCACG
CGGACCATCC CGACACCGAC GGGTACCCGA ACGCTCACAC AACGTGAGCT TGCTGGCTAC
CGGAACGCGT GGCCACCGGG GTAG
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| Protein sequence | MPATARYPCD LSAGSPTVDP LHTEQCGAVV AGLMSVARHR LGMELAVITR RVADVLVVEH
YDGDIESFGI TVGTTADYER TRAALEGRLP QVVRYAGQDG RTADPALARR VGIGSYVVAP
VLLPDGSVYG SLACMSHNPD PALRDRDASF LALIAGALSN CVSDHRGDWR ERDRVWRRIS
RLIDDGGPAM VFQPIYDRAT LDIAGVEALS RCPGTGTAGS DESSPQRWFA DAASVGLGVE
LEVAAIRNAL AALPWLPAGL PLSVNASPAA IVSGELIDLL ATIPPERVII EVTEHSRIDD
YPTVMLALDA LRSRGVRAAL DDVGAGYAGL HQLLQIRPDI IKIDQSIIRK IAEDAPACRA
LATALVCFAE DIGATVLAEG VETSRELEVL GEAGVHQVQG FLLARPGMLA SGPPPGTSGT
RTIPTPTGTR TLTQRELAGY RNAWPPG
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