| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4955 |
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| Symbol | |
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| ID | 5673294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5948790 |
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| End bp | 5949668 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641243809 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001509225 |
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| Protein GI | 158316717 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.220858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCGC GGCGTCACCT GCCCTTCCGG GTCCTCGGCC CGCTGGAGGT GAACGCGTCC
GACGGCCATA CCGTGCCGAT CGGGCAGCCG AAGAAGCGGC GCCTGCTCTC GCTGCTGCTG
TTCAGCCGCG GCCGCTGGAC GAGCACCGAG CGGATCCGCT CGGTGCTGTG GGACGCCGAC
CCGCCGCCCT CGGCCCTCGG CAACATCAAG ACCTACGTCT CCGACCTGCG CCAGATGCTC
CCGCCGGGGG AGACGGCCGG ACTCGGCCGC ATCCAGAGCC GGCCGGGCGG CTACCGGCTC
AACGCCGCCG CCACCGAGGT CGACGTCTGG ATCTTCGAGG ACGCGGCGCG CCGCGGCCAG
GACGCCCGGT GGGCCGGCGA CCGCGACCGG GCCGTCGATC TGTTCGGCGA CGCGCTGGCC
GTGTGGCGCG GCGAGCCGTA CGACGAGCTT CCCGAGGAGG TCACCCGCGC CGAGTCGGCC
CGCCTGCACG AACTGCGCGC GGTGGTGCAC GAGGACCTCA TCGACGCGCT GCTCGACCGC
GGCCAGTACG ACCGGGTCCT GCCGATGCTG CGGGCGCTGA CCGTCCAGCA CCCGCTGCGG
GAGCGGCTGT GGGGCCAGTT CCTGGTGGCG GCATGCCGCT CCGGGCACCG CGCCGAGGCG
CTCGCCGCCT ACCGCACCGC CTACCACCTG CTGTCCCGGG AGCTGGGCGT GGAACCCAGC
GGTGAGCTGC GCCGGATCCA CGCCCAGGTG CTCGCCGGCG AGCTTGACGC GACCACAGCG
CCGACCACAG CGCCGACCAC AGCGCCGGCC GGGGCGAATG GATGGGGCGG CGGCCGCGCG
CGCCCGCGCG CCGCCGGCGG ACGAGAGGAA CGGGTCTGA
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| Protein sequence | MEPRRHLPFR VLGPLEVNAS DGHTVPIGQP KKRRLLSLLL FSRGRWTSTE RIRSVLWDAD
PPPSALGNIK TYVSDLRQML PPGETAGLGR IQSRPGGYRL NAAATEVDVW IFEDAARRGQ
DARWAGDRDR AVDLFGDALA VWRGEPYDEL PEEVTRAESA RLHELRAVVH EDLIDALLDR
GQYDRVLPML RALTVQHPLR ERLWGQFLVA ACRSGHRAEA LAAYRTAYHL LSRELGVEPS
GELRRIHAQV LAGELDATTA PTTAPTTAPA GANGWGGGRA RPRAAGGREE RV
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