Gene Franean1_4949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4949 
Symbol 
ID5673288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5941163 
End bp5941933 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID641243803 
Productmethyltransferase type 11 
Protein accessionYP_001509219 
Protein GI158316711 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCG ACGACACCCA CGTGCGGAAC AATCGCACCC GGTGGAACGA GATCTCCGAC 
GACTACCAGC GGTTCAACGC CCCCCAGATC CGCGGGCAGG CGTTCACCGG CGACATCACC
TGGGGGGTGT GGGGCATCCC CGAGTCGCGG CTGAATGTCC TCGGCCACGT CGTCGGACTC
GACGTGCTGG AGATGGGCTG CGGCGGGAGC CAGTGGTCGA CCGCGCTCGC CCGCCGCGGC
GCGCATCCGG TGGGGCTCGA CCTCTCCGAG CGCCAGCTGC ACCACAGCCG CCGGCTCCAG
CGCGAGACCG GGCTCGACTT CCCGCTCGTG CAGGCCAGCG CGGAGGAGGT GCCGTTCGCG
GCCGGGTCGT TCGACATCGT CTTCGCCGAT CACGGCGCCT TCTCGTTCGC CGATCCCTAC
CGGGCGATCC CCGAGGCGGC CCGGATCCTG CGCCCCGGCG GCCTGCTCGC CTTCGGTCAC
GTGAGCCCGA TCTACGAGAT CAGCATCCCG GACGGCGCCG AGGCCGCCGG CGACCGGCTC
GTCGGTGACT ACTTCGGCCT GCGCCTCATC TCCGACACCG ACGGCCTGGT CAGCGCGAAC
CTGCCGTACG GGGCCTGGAT CAGGCTGTTC CGCGAGAGCG GGTTCGTCGT CGAGGACCTC
GTCGAGCCGA GGCCCGAGAC CGGCACGGAC GCCACCCACC GCGACAGCGC CGAGGAGGCG
TGGGCGCGCC GGTGGCCCTC GGAGTGCATC TGGAAGGTCC GCCGGGTCTG A
 
Protein sequence
MIGDDTHVRN NRTRWNEISD DYQRFNAPQI RGQAFTGDIT WGVWGIPESR LNVLGHVVGL 
DVLEMGCGGS QWSTALARRG AHPVGLDLSE RQLHHSRRLQ RETGLDFPLV QASAEEVPFA
AGSFDIVFAD HGAFSFADPY RAIPEAARIL RPGGLLAFGH VSPIYEISIP DGAEAAGDRL
VGDYFGLRLI SDTDGLVSAN LPYGAWIRLF RESGFVVEDL VEPRPETGTD ATHRDSAEEA
WARRWPSECI WKVRRV