| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4939 |
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| Symbol | |
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| ID | 5673278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5929218 |
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| End bp | 5930243 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243793 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_001509209 |
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| Protein GI | 158316701 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.553857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.665559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACG TTCCTCCCGG CGGCAGAACC GGCGGGGCTG CTCTGGCCGG GGCGGAGGCG
GGTGTCGAGA ATCTTCTCGA GCCGTACCGC CGCGAGCTGA CCGGCTATTG CTACCGAATG
CTCGGCTCGC CGTTCGAGGC GGAGGACGCC GTGCAGGACA CGATGATCCG CGCCTGGCGC
GGAATCGACC GGTTCGAAGG CCGGGCCGCG CTGCGGTCGT GGCTGTACCG CATCGCGACG
AACGTGTGCC TGTCGATGCT CGGCGCCAGT CAGCGGCGGG CACGGCCGAT GGACCTCGCC
GGCCCGTCGG CGGCCGACTC CCCGCTGCCC GCGCCGCTGC CGGAGACGGC CTGGATCGTG
CCCGCGCCGG ACGGCCAGGT CTACTCCAGC GCCGCCGACG CGGCCGACCC CGCCGATCTC
GCCGCCCGTC GCGAGACGAT CAGGCTCGCG TTCGTCGTCG CGCTGCAGCA CCTGCCGGCC
CGCCAGCGGG CGGTGCTCAT CCTGCGCGAG GTGTTCGGCT GGCCGGCCGC CGAGGTCGCC
GACCTGCTGG AGACCTCCGT CGCCTCGGTC AACAGCGCCC TGCAGCGGGC GCGCGCCACG
ATCGCCGCGA CGGAGATCTC CGACGCCGAC CCGCTGCGCC CCGCCGACGC CGAGCAGCGG
GAGCTGCTCG CCCGCTATGT CGACGCGTTC GAGCGGTACG ACCTCGAGTC CCTCGCGGCG
CTGCTGCACG AGGACGTCAC GATGTCGATG CCGCCGCTGG GCCTGTGGCT GCGGGGCCAC
GCCGACGTCC GGGCATGGAT GCTCGGTACG GGCCAGGGCT GCCGGGGCTC GCGGCTGCTG
CCAACCGTGG CCAACGGCCA CCCGGCCTTC GGGCAGTACC GGCCCAGCGC CACGGGTTCC
GGGCACGACC CGTGGGGCCT GGTCGTCCTG GAGATCTCGG CCGGGCGGGT CGCCGGCATC
AACACGTTCC TGGACGTCGA ACGCCTCTTC CCGCTGTTCG GCCTGCCGGC CCGGTTGCCT
GGCTAG
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| Protein sequence | MGDVPPGGRT GGAALAGAEA GVENLLEPYR RELTGYCYRM LGSPFEAEDA VQDTMIRAWR
GIDRFEGRAA LRSWLYRIAT NVCLSMLGAS QRRARPMDLA GPSAADSPLP APLPETAWIV
PAPDGQVYSS AADAADPADL AARRETIRLA FVVALQHLPA RQRAVLILRE VFGWPAAEVA
DLLETSVASV NSALQRARAT IAATEISDAD PLRPADAEQR ELLARYVDAF ERYDLESLAA
LLHEDVTMSM PPLGLWLRGH ADVRAWMLGT GQGCRGSRLL PTVANGHPAF GQYRPSATGS
GHDPWGLVVL EISAGRVAGI NTFLDVERLF PLFGLPARLP G
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