| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4931 |
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| Symbol | |
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| ID | 5675745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5920068 |
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| End bp | 5921561 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243785 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001509201 |
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| Protein GI | 158316693 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.475051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.080695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA ACGAGATCCT GCGACGGGCG AGCTACGGCC CCACCAGTCC GGTGGTGGGG
GCACGCGGTT CACGCACCCG CACGCGCATC GTCGACACGG CGCTGGCGCT ATTCGAATCC
CAGGGCTTCC ACGGCACGTC GGTGGACGAC ATCGCGAAGG CCGCCGAGGT GTCCCGGGCC
ACGTTGTACC AGTATTTCGA GAGCAAGGAA CAGATCTTCG TCGAGCTGCT CGAGGAATGC
GGCGGCGCGC TCATGCGGGT GGTTCGCCGC ATCGGCCCGC TGGAACCCAG CGAGCTCGGC
TTCGACAATC TGCACTGGTG GCTCGGCGAG TGGGCCTGGG TGTACGACAG GTACGCGACG
ATGTTCGTGC AGTGGGCGAA CATCAGTTCG CCCGGCACCG CGATACCGCC GCTGGTCAGC
CGCTTCTCGG CCGCCTACCG GGAGCGGATC GCGCAGCGGC TGACCTCGTC GGGGGTGACC
GGCCTCGCCG CCGCCGACGC GGCGCTGACA CTGACCGCGC TGGTGAGCAG CTGTAACTAC
ACGCGCCATG CCGATGCGCC GCTCGGCCGT GAACACCCCG GCACCGGGCC GGCCGCCCGC
GGCACGGTGA TGGGCACCGA CTACCTGACC GACAACCTCG CCGTGCTGGT CCAGCTCATC
CTTTTCCCGC ACACCCCCGT GAGTGTTTTC GCCCAGCTGG GCCGGGAGAT CCCCACCCCG
CGCCCGCCGA GCACCGGAGA ACGCCTCTGG TCCGTACCGG CACCGGCGGC CGGGCCGCCG
CCGGCTTTGC CGCCGGATGG CCGTCTGCGG CAACTCAGCA GCCGCGCCAC GGTGACCGTT
CGGCGACTTC TCGACGCCGG GATCAGATGT TTCACCGAAA AGGGCTACCA CCAATGCTCG
GTCGACGACA TCGTCACCGA GGCGGGTTAC GCGCGCGGCA CGTTCTACAA GTATTTCGAC
GAGAAACTCG ACCTGCTGGT GGCGCTGAGC GACGAGGCGA TCGAGACGAT CACCGAGCTC
GACGGCCGGC TGCGGCGGAT CGGCCCGACT CTCGGGAGCG ACCCCGCCCA GCTACGGAGC
TGGCTCGGTG ACGCCGTCGC GTTCCACCTG CGGTACCTGG GCGTCACACG GGCCTGGCTC
GACCGGCGGC CGTGCCACCC ACGCCTCGAC GCGGCCCGCC GGCTCGTCGG CGAACGGCTG
CACACCGGCT ACACCGCCCT GCTGGGCCCG GCGCGCTGGT CGCATCCGCT TGATCCGCGG
GTCGCCAGCA TCGCGTTCTT CACCCTGCTG GAGCGACTGC CCGAGGCGAT GGTGGCGGCC
GAGCCGGACC GCCCGCTCAC GGAGATCGTC GACCTCGTCG CCACGGTGCT CGAACGCGCG
CACCTGTGCC CCCAGAGCGG CCCCCACGAC TCCCAGCCCG CCGGCGCCGA CCAAGACAGC
GCCCGGGCCG CCGCCGCGTC CGTCCCCTCG GGACGCCACC TCCCCCGGCC CTGA
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| Protein sequence | MSENEILRRA SYGPTSPVVG ARGSRTRTRI VDTALALFES QGFHGTSVDD IAKAAEVSRA
TLYQYFESKE QIFVELLEEC GGALMRVVRR IGPLEPSELG FDNLHWWLGE WAWVYDRYAT
MFVQWANISS PGTAIPPLVS RFSAAYRERI AQRLTSSGVT GLAAADAALT LTALVSSCNY
TRHADAPLGR EHPGTGPAAR GTVMGTDYLT DNLAVLVQLI LFPHTPVSVF AQLGREIPTP
RPPSTGERLW SVPAPAAGPP PALPPDGRLR QLSSRATVTV RRLLDAGIRC FTEKGYHQCS
VDDIVTEAGY ARGTFYKYFD EKLDLLVALS DEAIETITEL DGRLRRIGPT LGSDPAQLRS
WLGDAVAFHL RYLGVTRAWL DRRPCHPRLD AARRLVGERL HTGYTALLGP ARWSHPLDPR
VASIAFFTLL ERLPEAMVAA EPDRPLTEIV DLVATVLERA HLCPQSGPHD SQPAGADQDS
ARAAAASVPS GRHLPRP
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