Gene Franean1_4929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4929 
Symbol 
ID5673269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5918486 
End bp5919337 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content74% 
IMG OID641243784 
Productputative methyltransferase 
Protein accessionYP_001509200 
Protein GI158316692 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3315] O-Methyltransferase involved in polyketide biosynthesis 
TIGRFAM ID[TIGR00027] methyltransferase, putative, TIGR00027 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.83161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0723048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACGGA CGGCCCTGGC CACGGCGTGG ATCCGGGCCG GGGAGAGCGA GCGTCCGGAC 
CGGCTGTTCG ACGACTGGCT GGCACCGGCG TTCGTGGCCG CGGCGGGCGA CGCGCTGCCG
CTGATCCCAC CCGACGCCGG CGGCCGGCTG GGCGCACTCG CCGAGATGAT GAACGCCTAT
CTGGCCGTGC GAACCAGGTT CTTCGACGAC GAGCTGCTCG CCGCCGCGGA GGCGGGCGTC
CGGCAGGTGG TGCTGCTCGC GGCCGGTCTC GACAGCCGCG CCTTCCGCCT CCCCTGGCCG
GCCGGGACGC GCCTGTTCGA GGTCGACCGG CCGGACATAC TGGCCTTCAA GGAGCAGGTC
CTGGCCGCGG GTGAGACCGG GCCGCGGTGC GAGCGTCACG CCGTGTCGGC CGACCTGACC
GAGGACTGGG CCGATGAGAT CCTCGATGCC GGCTTCCGCC CGGCCGAGCC CACTGCCTGG
CTGGCCGAAG GCATCATCGT CTACCTGTCC GCGGAGGAGG CCGAACGCCT GCTCACCGAC
GTCACCCGTC TTTCGGCTCC GGGCAGCCGG CTCGCGCTGG AGGACGCGAA GGGCCTGGCC
GAGGAGATGG TCGAGGAGGC CCGGAACATC CCCCCGTTGG GGGAGTTCGC CGACCTGTGG
AAGGGCGGCC TGGAGGGGGC CTCCCCCGCC TGGCTGGGTG ACCACGGCTG GCGCGGCCGG
GAGATCGACT CCACCACCGT GGCGACCGAG CTGCGCCGGC CGATCCCGGC GGAGATGCCC
GTCGCCGGCT ACTTCGTCAC GGCTCAGCGG GCGGTGGGTG AGCGGGCAGA GGGTGAGCGG
GCAGAGGGGT GA
 
Protein sequence
MGRTALATAW IRAGESERPD RLFDDWLAPA FVAAAGDALP LIPPDAGGRL GALAEMMNAY 
LAVRTRFFDD ELLAAAEAGV RQVVLLAAGL DSRAFRLPWP AGTRLFEVDR PDILAFKEQV
LAAGETGPRC ERHAVSADLT EDWADEILDA GFRPAEPTAW LAEGIIVYLS AEEAERLLTD
VTRLSAPGSR LALEDAKGLA EEMVEEARNI PPLGEFADLW KGGLEGASPA WLGDHGWRGR
EIDSTTVATE LRRPIPAEMP VAGYFVTAQR AVGERAEGER AEG