Gene Franean1_4924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4924 
Symbol 
ID5673264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5913106 
End bp5913756 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content76% 
IMG OID641243779 
ProductTetR family transcriptional regulator 
Protein accessionYP_001509195 
Protein GI158316687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0122195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGACA CTGCCTACGT GACGGGTGAA GGGGCGCTGC GGCGCCGGCT GGTCGAGGTG 
GGCACGGCGA TGCTCGACGA GGGCGGGACA GCCGCCGTCA GTCTGCGGGC GATCGCGCGG
CAGGCGGGTG TCTCGCACGG CGCGCCCCGG CGGCACTTCC CCACCCACGC GGCGCTGCTC
GCGGCGATCG CGGCCGAGGG GCTGGCCGAT CTCGCCTCCC GTCTGGCCGG GGTCCGGGCG
GCCGGCGAGG CGGCCGGAGC CTCCCCGCAC GAGTGCGTCG TCGACGCCGG GTCCGCGTAC
GTCCGCTTCG CTCGCGAGCG GCCCGCCATG TTCGAGCTGA TGTTCCGGCA CGACATCCTG
GTCGGGGCGG GGGAGAACCT CCGTGAGCGG AGCCTGCCGT TGTTCGACGC CTGGACCGAT
CTCGTCCGGG CCGCGCTGCC CGCGCCGCCC GCCGGAGCGG GCGCGGGCGC GGGCGCGGAC
CCGCCGGAGC AGGTGCGCAG GCGGGCACTG CTGGCGTGGA CGCACCTGCA CGGCATCGCC
GTGCTCGCGG CCAACGAGAG CCTGGGGCTG GTCACCGCAT CACCCGATCC CACCGAGCTG
GTCGTCGAGG CGATCGGTGT CCACCTGTGC CCGGATGCGG GGCCGCGCTG A
 
Protein sequence
MVDTAYVTGE GALRRRLVEV GTAMLDEGGT AAVSLRAIAR QAGVSHGAPR RHFPTHAALL 
AAIAAEGLAD LASRLAGVRA AGEAAGASPH ECVVDAGSAY VRFARERPAM FELMFRHDIL
VGAGENLRER SLPLFDAWTD LVRAALPAPP AGAGAGAGAD PPEQVRRRAL LAWTHLHGIA
VLAANESLGL VTASPDPTEL VVEAIGVHLC PDAGPR