Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4924 |
Symbol | |
ID | 5673264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5913106 |
End bp | 5913756 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641243779 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001509195 |
Protein GI | 158316687 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0122195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGACA CTGCCTACGT GACGGGTGAA GGGGCGCTGC GGCGCCGGCT GGTCGAGGTG GGCACGGCGA TGCTCGACGA GGGCGGGACA GCCGCCGTCA GTCTGCGGGC GATCGCGCGG CAGGCGGGTG TCTCGCACGG CGCGCCCCGG CGGCACTTCC CCACCCACGC GGCGCTGCTC GCGGCGATCG CGGCCGAGGG GCTGGCCGAT CTCGCCTCCC GTCTGGCCGG GGTCCGGGCG GCCGGCGAGG CGGCCGGAGC CTCCCCGCAC GAGTGCGTCG TCGACGCCGG GTCCGCGTAC GTCCGCTTCG CTCGCGAGCG GCCCGCCATG TTCGAGCTGA TGTTCCGGCA CGACATCCTG GTCGGGGCGG GGGAGAACCT CCGTGAGCGG AGCCTGCCGT TGTTCGACGC CTGGACCGAT CTCGTCCGGG CCGCGCTGCC CGCGCCGCCC GCCGGAGCGG GCGCGGGCGC GGGCGCGGAC CCGCCGGAGC AGGTGCGCAG GCGGGCACTG CTGGCGTGGA CGCACCTGCA CGGCATCGCC GTGCTCGCGG CCAACGAGAG CCTGGGGCTG GTCACCGCAT CACCCGATCC CACCGAGCTG GTCGTCGAGG CGATCGGTGT CCACCTGTGC CCGGATGCGG GGCCGCGCTG A
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Protein sequence | MVDTAYVTGE GALRRRLVEV GTAMLDEGGT AAVSLRAIAR QAGVSHGAPR RHFPTHAALL AAIAAEGLAD LASRLAGVRA AGEAAGASPH ECVVDAGSAY VRFARERPAM FELMFRHDIL VGAGENLRER SLPLFDAWTD LVRAALPAPP AGAGAGAGAD PPEQVRRRAL LAWTHLHGIA VLAANESLGL VTASPDPTEL VVEAIGVHLC PDAGPR
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