Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4923 |
Symbol | |
ID | 5673263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5910751 |
End bp | 5912985 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641243778 |
Product | RecD/TraA family helicase |
Protein accession | YP_001509194 |
Protein GI | 158316686 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.478208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0184045 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCGAC CCGCCGCCGC GCCGTTCCAG CTCGCCGTGC TCGAGGCCGT CCTCGAACGG ATCACCTACG CCAACGAGGA GACCGGGTAC ACCGTCGCCC GCGTCGACAC GGGCCGCGGC GGCGACCTGC TGACGGTCGT CGGCGCGCTG CTCGGAGCCC AGCCCGGCGA GTCGCTGCGG ATGCGCGGGC GGTGGGGCTC GCATCCCCAG TACGGCCGCC AGTTCCAGGT CGAGGACTAC ACCACCGTCC TGCCGGCCAC TGTCCAGGGC ATCCAGCGGT ACCTCGGATC AGGCCTGGTC AAGGGGATCG GGCCCCGGTT CGCCGAGCGC ATCGTCGAGC ACTTCGGCGT CGACGCGCTG GACGTCATCG AGACCGAGCC GGCGCGGCTC ATCGAGGTTC CGGGTCTCGG CCCCAAGCGG ACGAAGGCGA TCGCCGCGGC CTGGGAGGAA CAGAAGGCCA TCAAGGAGGT CATGGTCTTC CTACAGGGCG TGGGCGTCTC GACCTCGCTG GCGATCAAGA TCTACAAGCA GTACGGGGAC GCCTCGATCG GAGTGGTGCG CACCGAGCCC TACCGGCTGG CCGCCGACGT GTGGGGCATC GGGTTCCGCA CCGCGGACAC CATCGCGCAA GCGGTCGGCA TCCCACACGA CAGCCCGCAG CGCATCAAGG CCGGGCTCGC GTTCACCCTC TCCGAGGCCA CCGACAGCGG CCACTGCTTC CTGCCCGAGA CCCGGCTGAT CGCCGACGCC GTGCGCATTC TCGGCGTCGA CACCGGCGCG GTGATCGAGG GGCTCGGCGA GCTGATCACC GAGGAGGGGG TGGTGCGCGA GGACGTCCCC GGCGAGGACC CGGAGCAGCC GGTCGCCGCG GTGTACCTCG TCCCGTTCCA CCGCGCCGAG ATCTCCGTCG CGGGGCAGCT GCTGCGCCTG CTGCGGGCCG ACGAGGACCG CCTCGCCGCG TTCGCCGCCG TCGACTGGGA GAAGGCGCTC GGCTGGCTGC ACACCCGTAC CGGGACCGAG CTGGCGGCGG CGCAGCGCGA GGCGGTCACC CTCGCTCTCA CCTCCCGGGT GGCGGTGCTG ACCGGCGGGC CCGGCTGCGG GAAGAGCTTC ACGGTGCGCT CGGTCGTCGA GCTGGCCCGC GCCCGGCGGG CGAAGGTCGT CCTCACCGCC CCGACCGGAC GGGCCGCCAA GCGGCTCGCC GAGCTGACCG GCCACGAGGC GTCGACGGTG CACCGGCTGC TCGAGCTGCG CCCCGGCGGC GACGCGGCCT ACGACCGGGA CCGCCCGCTC GACGCCGACC TCGTCGTGGT GGACGAGGCG TCCATGGTCG ACCTGCTGCT GATGAACAAG CTGGTCAAGG CCGTCCCGCC GGGCGGGCAC CTGCTGCTGG TGGGCGACGT CGACCAGCTT CCCTCCGTCG GCGCCGGGCA GGTGCTGCGT GATCTGCTCG CGTCCGGCAC GCCGATCCCG CACGTGCGGC TGACCCAGGT GTTCCGCCAG GCCAGCGAGT CGGGCGTGGT GACCAACGCG CACCGCATCA ACCGCGGGGA CCATCCGCTG GTGCGCGGCC TGGACGACTT CTTCCTCTTC GTCGCCGAGG AGGCCGAGGA CGCCGCCCGG ATCACCGCGG AGGTGGTGGC GCGGCGGATC CCGGCCAAGT TCGGCCTCGA CCCGCGGCGC GACATCCAGG TGCTCGCGCC GATGCACCGC GGCCCGGCCG GCGCCGGGGC GCTCAACATC GCGCTGCAGG AAGCACTCAC GCCGAGCCTG CCGGACCGCC CCGAGCGCCG CTTCGGCGGC CGGGTGTTCC GGGTCGGCGA CAAGGTCACC CAGGTGCGCA ACAACTACGA CAAGGGCGCG AACGGGGTGT TCAACGGGAC GCTCGGGGTA GTCACCGCGC TCGACAACGA CAACCAGACC CTGACCGTCC GCACCGACGA GGACGAGGAC GTCGACTACG AGTTCACCGA GCTCGACGAG CTGACCCACG CCTACGCGGT GACTATCCAC CGTTCGCAGG GCAGCGAGTA CCCGGCCGTG GTCATCCCGC TGACGACCAG CGCATGGATG ATGCTGCAGC GCAACCTGCT GTACACGGCG GTGACGCGGG CGAAGAAGCT GGTGGTCCTG GTCGGCTCGC GCCGGGCCAT CGGGCAGGCG GTCCGCTCGG CCGGCCACGG GCAGCGCCAC ACCGCGCTCG CGCACCGCCT GCAGTCCGCC GGGCGCTCCG GATAG
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Protein sequence | MSRPAAAPFQ LAVLEAVLER ITYANEETGY TVARVDTGRG GDLLTVVGAL LGAQPGESLR MRGRWGSHPQ YGRQFQVEDY TTVLPATVQG IQRYLGSGLV KGIGPRFAER IVEHFGVDAL DVIETEPARL IEVPGLGPKR TKAIAAAWEE QKAIKEVMVF LQGVGVSTSL AIKIYKQYGD ASIGVVRTEP YRLAADVWGI GFRTADTIAQ AVGIPHDSPQ RIKAGLAFTL SEATDSGHCF LPETRLIADA VRILGVDTGA VIEGLGELIT EEGVVREDVP GEDPEQPVAA VYLVPFHRAE ISVAGQLLRL LRADEDRLAA FAAVDWEKAL GWLHTRTGTE LAAAQREAVT LALTSRVAVL TGGPGCGKSF TVRSVVELAR ARRAKVVLTA PTGRAAKRLA ELTGHEASTV HRLLELRPGG DAAYDRDRPL DADLVVVDEA SMVDLLLMNK LVKAVPPGGH LLLVGDVDQL PSVGAGQVLR DLLASGTPIP HVRLTQVFRQ ASESGVVTNA HRINRGDHPL VRGLDDFFLF VAEEAEDAAR ITAEVVARRI PAKFGLDPRR DIQVLAPMHR GPAGAGALNI ALQEALTPSL PDRPERRFGG RVFRVGDKVT QVRNNYDKGA NGVFNGTLGV VTALDNDNQT LTVRTDEDED VDYEFTELDE LTHAYAVTIH RSQGSEYPAV VIPLTTSAWM MLQRNLLYTA VTRAKKLVVL VGSRRAIGQA VRSAGHGQRH TALAHRLQSA GRSG
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