Gene Franean1_4918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4918 
Symbol 
ID5673258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5905841 
End bp5906299 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content68% 
IMG OID641243773 
ProductMerR family transcriptional regulator 
Protein accessionYP_001509189 
Protein GI158316681 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00502538 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCCACGA CAGGCAACAT CACCTCTTCC TCAGCCCGCC GCGGCGTCTA CGAGATCGGA 
GAGGTCGCCA CCCTGGTCGC GCTCTCCCTG CGGACGGTCC GCTTCTACGA GGAAGCCGGC
CTGCTCGTGG CCGTCGGGGA GAGCCCCGGC GGCTATCCGC TCTACGACGA CGACGCTCTG
GATCGTTTCC TTCTCATCAA GAAGATGAAG CCGCTGGGTT TCACCCTCGA GGAGATGCGG
GCGCTACTCG GCCTGCGCGA GGAGATCGAC CGGGAGGGCC TCGCCCGCGA GCGGCGCGAG
GAGCTCCAGG AGCGGCTGGC GACCTGGGTC AGCCTCGCCG AGGAGAAGCT GGCCTCGCTG
CAGGAGCAGG TCCGCGTCGC CGAGGACTTC ATGGTCACGC TGCACGACGA CACCGCCCGG
GCCCGGCTGC GCTTCGACAT CGATCCGGAC GCCTTCTAG
 
Protein sequence
MSTTGNITSS SARRGVYEIG EVATLVALSL RTVRFYEEAG LLVAVGESPG GYPLYDDDAL 
DRFLLIKKMK PLGFTLEEMR ALLGLREEID REGLARERRE ELQERLATWV SLAEEKLASL
QEQVRVAEDF MVTLHDDTAR ARLRFDIDPD AF