| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4896 |
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| Symbol | |
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| ID | 5673236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5876429 |
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| End bp | 5878345 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243751 |
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| Product | hypothetical protein |
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| Protein accession | YP_001509167 |
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| Protein GI | 158316659 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5305] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.303518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0951056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGCG CAGACGACCT GCCGACCGGC CAGGTCACGG GCACTACCGC GGAGCCGGCA
GCCGCGGAGC CGGCAGCCGC GGCTGTGGCG CCTCGGCCGC GGTCGGCGCA GGTCCCACCG
AACGACCATG CGGTGCTGAC CGGCCGGCCC CCGCGCACCG AGCTGCCCGC GGAGACCCAG
CCGGACGCGG AGACCCAGGC GGACGCGCAG ACCATGACCG CTGCGGAGAC CGAGCCGAGC
GCGGAAGCGC CGCCCGCCGC GGAGGCGGAG CCGGGTGAGC AGACCGTGCC CGCCCAGCGG
ACCGATTACC CATCGCGGGC CGAGCCGGCG CGGCTGATCG CCCGGTTCCG CCGGGCCCGG
GACTGGACCG TCGCGGCCTC GTACCAGTTC TTCCTGGCCG GGACGCTCCT GGCGGTCACC
GTCGGTGCCG TGCTGCGGTT CGCCACCCCG AGCCATCTGT GGCTCGACGA GTCGCTCACC
GTCGGCATCG CGTCCCGGCC GGTGCCGGAC CTGCTGCAGG CGCTGCGTCA TGACGGGTCG
CCCCCGCTCT ACTACCTGCT CTTGCACCTC TGGATCAGCG TGTTCGGTGA CGGGGACATC
GCCGTCCGGG CGCTGTCGGG CGTGCTCTCC CTCGCCACAC TCCCGCTGGC CTGGCTCGCC
GGGCGGTACG TGGGCCGGGC GGCGACCGCC CTCGGCAACG GCGGGCCGTC GGCCGAGCAG
CGGGTCGGGC TCGCCGCGCT CCTGCTGTTC GCCTGCTCGC CGTACGCGAT CCGCTACGGC
AGCGAGACGC GGATGTACTC GCTGGTCGTC CTGCTCGTGC TGGTGTTCGG CTTCGCCGCC
GTCCGGGCGC TGAACCGGCC GGACCTGCCA CGGCTCGCCG CGCTGACGCT GGCGACGGCC
GCCCTGGTCT ACACGCACTA CTGGACGTTC CTGGTGGTGT TCACCGTGGC GGCGTTCCTG
CTCCTGCAGG CGCGGCGGCG GGAGCACTAC CGCCGCCCGG CGCTGCGGGC GTTCGTCGCG
ATGGCCGCCT CGGCGGTGCT GTTCGCGCCC TGGATGCCGG TGTTCCTCTT CCAGATGCTG
CACACGGGGA CACCCTGGGC GCCCCGGGTG CAGGCCCAGG TGCTGCTCGA CACGGTCTTC
GACTGGGCCG GCCCGCAGTC GACCGGCGCG CTGCTGGGCA TCATCCTGCT CGGCGGGGCG
CTGATCGGGC TGACGGCCCG TCCGCTCGGC GGGGAGCTGC ACGTCAAGAT CTCCGGGCGG
GCGCCGGGCA GGTACCTCGC CGCGATCTGG CTCGCGCCGC TGGTGCTGGC GTACTTCGTC
AACATGTTCG GCGGCAGCGC CTACGCGGAG CGCTACACCG GGATCGCGCT GCCCGCCTGC
CTGCTGCTCG CGGCGCTCGG GATAGCGCAA CTGCCGGTGC ACCGGGCGTT CGTGGCGGTG
GTCGTGGTCG CCTCGATCAG CGGCCTGCTC GGTGGGTACC AGCTCGCCCG GACGGAGCGG
ACCCAGGCGG GCGAGATCGC CAACCGGATC GCCGACCTCG CCCGGCCGGG GGACGTCGTC
GCCTACTGCC CGGACCAGCT CGGCCCGGCC GTGCACCGGG CGATCCAGCG CCGGGGCGGC
ATCGACGTCC GGGAGATCGT CTACGCGGAC GAGGCCGGGC CGGCGCTGGT CGACTGGGTC
GACTACGCCG ACCGGATGAA ACGCGCGAAC GGTGCGGCCT TCGCGGCCGA GGTCAACGAC
CTGGCCGGGC CCGATCACGC CGTCCTGCTC GTCCGGGCGG ACGGGTACCG CTTTCTGGAG
GGCGCGTGCG CGGTGCTCTC CGACCAGCTG GCGTCCCTAC GGGACCGGGC GTTGCAGGTC
GAGAAGCGCG ATCTTTACGA GGGTGCCTCC CTCGAGCGGT TCTCCACCCT GCGCTGA
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| Protein sequence | MVSADDLPTG QVTGTTAEPA AAEPAAAAVA PRPRSAQVPP NDHAVLTGRP PRTELPAETQ
PDAETQADAQ TMTAAETEPS AEAPPAAEAE PGEQTVPAQR TDYPSRAEPA RLIARFRRAR
DWTVAASYQF FLAGTLLAVT VGAVLRFATP SHLWLDESLT VGIASRPVPD LLQALRHDGS
PPLYYLLLHL WISVFGDGDI AVRALSGVLS LATLPLAWLA GRYVGRAATA LGNGGPSAEQ
RVGLAALLLF ACSPYAIRYG SETRMYSLVV LLVLVFGFAA VRALNRPDLP RLAALTLATA
ALVYTHYWTF LVVFTVAAFL LLQARRREHY RRPALRAFVA MAASAVLFAP WMPVFLFQML
HTGTPWAPRV QAQVLLDTVF DWAGPQSTGA LLGIILLGGA LIGLTARPLG GELHVKISGR
APGRYLAAIW LAPLVLAYFV NMFGGSAYAE RYTGIALPAC LLLAALGIAQ LPVHRAFVAV
VVVASISGLL GGYQLARTER TQAGEIANRI ADLARPGDVV AYCPDQLGPA VHRAIQRRGG
IDVREIVYAD EAGPALVDWV DYADRMKRAN GAAFAAEVND LAGPDHAVLL VRADGYRFLE
GACAVLSDQL ASLRDRALQV EKRDLYEGAS LERFSTLR
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