Gene Franean1_4894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4894 
Symbol 
ID5673234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5872936 
End bp5873760 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content75% 
IMG OID641243749 
Productphosphoglycerate mutase 
Protein accessionYP_001509165 
Protein GI158316657 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0936935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.080695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCACCG TCCTGCTGGT CCGGCACGGC CTCACCGCGG TCACCGGCAA GATCCTGCTC 
GGCTGGACCC CGGGCGTCGG GCTCGACGAG CGGGGCCGCC GGCAGGCCGA GGCGCTGGCC
GGGCGGCTCG CCGACATCCC GCTCGCCGCG ATCGTGTCCA GCCCGCTCGA CCGCTGCCAG
CAGACGGCCG CGGAGATCGC CCGGCGCCGC CCGGAGGGCC CGTCCGCGCC CGCCGGGGTG
CAGAAGATCG ACACCGACGA GCGGATAGGA GAGTGCCACT ACGGCGACTG GACGGGGCAG
GAACTCGCGA CCCTGGCGAA GGAACCGCTG TGGAAGGTGG TGCAGGCCCA GCCGAGCGCG
GTGACGTTCC CCGGCGGGGA GGCGCTGCGT GACACCCAGT CCCGCGGCGT CACGGCGGTG
CGCGAGTGGA ACGAGCGCCT CGGCCCGGAC GCGACCTGGC TGCTGTGCTC GCACGGCGAC
GTGATCCGGA CCGTCCTCGC CGACGCCCTC GGCATGCACC TGGACATGTA CCACCGGATC
ACCGTCGACC CGTGCTCGCT CACGGTCGTC CGCTACGGCG ACCACCGGCC GTTCGTGCGC
CGCGTCAACG ATGTCGGCGG AGCCGTCGCC GACCTGCTGC CCGCACCGCC GTCGCCAGCG
GGCGACGGGA AGCGTCCCCG CGAGGACGAG GTCGTGGGAG GTGGCGCCGG CGCCGAGCCG
CCCGTGGACG GTGCCCGGCC GGGCACGGTC TCCGAGGCGG CCGGGGCCGG ATCGGGCGGG
GCCACATCCC CGGTCGCGCC GCCGACGTCC AAACTGGAAC CGTGA
 
Protein sequence
MTTVLLVRHG LTAVTGKILL GWTPGVGLDE RGRRQAEALA GRLADIPLAA IVSSPLDRCQ 
QTAAEIARRR PEGPSAPAGV QKIDTDERIG ECHYGDWTGQ ELATLAKEPL WKVVQAQPSA
VTFPGGEALR DTQSRGVTAV REWNERLGPD ATWLLCSHGD VIRTVLADAL GMHLDMYHRI
TVDPCSLTVV RYGDHRPFVR RVNDVGGAVA DLLPAPPSPA GDGKRPREDE VVGGGAGAEP
PVDGARPGTV SEAAGAGSGG ATSPVAPPTS KLEP