Gene Franean1_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4890 
Symbol 
ID5673230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5868444 
End bp5869286 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content73% 
IMG OID641243745 
Producthypothetical protein 
Protein accessionYP_001509161 
Protein GI158316653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.469947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0846818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGT TCTCCGGCGT CGGCCAGCTG CGGTCGCCGG TGGTCGTGGC CGCCTTCGAG 
GGGTGGAACG ACGCCGCCGA CGCGTCGTCG GCGGCCGTCG AGCACCTGGA GAACGTCTTC
GGTGCCCGCG TCATCGGCGC GATCGACCCG GACGACTACT ACGACTTCCA GGTCAACCGG
CCGACGGTTA GCGGTGCGGA CGGCGCGTCA CGCAAGATCG CCTGGCCGAC CACGCGGCTC
TCGGTGGCGC GGCCGGCGAA GTCCGAATCC GACCTGGTGC TCGTGCGGGG CCTGGAACCG
AACATGCGCT GGCGGGGATT CACCGACGAG CTCATCGAGG CCGTCCACGC ACTCGGTAGC
GACATGGTCA TCACGCTCGG GGCGCTGCTG GCGGATTCGC CGCACACCCG CCCCGTCCCG
ATCAGCGGTA CCGCCGGGGA TCCGGCCACC GCCGCGCGGC TGGGCCTCGA GGCCTCCCGC
TACGAGGGGC CGACGGGCAT CGTGGGCGTG TTCGCGGACG CCTGCTCGCG AGCGGAGCTG
GCCTCGGTGT CGTTCTGGGC TGCCGTGCCG CACTACGTCG CCAACCCGCC GTGCCCGAAG
GCCACCCTCG CGCTGCTCCG CCGGGTCGAG GATCTTCTCG ACATGGAGAT CCCGCTCGGC
GAGCTGCCGG ACAAGGCCAA GGCGTGGGAG CGGCAGGTCG ACGAGCTCGC CGCCGGGGAC
ACCGAGGTCG CCGAGTACGT CCGCTCGCTG GAGTCGCGCG AGCCGGAGAC GGCGCTGCCC
GAGGCCAGCG GCGACGCCAT CGCCCGGGAG TTCGAGCGCT ACCTGCGCCG CCGGGGGGAG
TGA
 
Protein sequence
MIEFSGVGQL RSPVVVAAFE GWNDAADASS AAVEHLENVF GARVIGAIDP DDYYDFQVNR 
PTVSGADGAS RKIAWPTTRL SVARPAKSES DLVLVRGLEP NMRWRGFTDE LIEAVHALGS
DMVITLGALL ADSPHTRPVP ISGTAGDPAT AARLGLEASR YEGPTGIVGV FADACSRAEL
ASVSFWAAVP HYVANPPCPK ATLALLRRVE DLLDMEIPLG ELPDKAKAWE RQVDELAAGD
TEVAEYVRSL ESREPETALP EASGDAIARE FERYLRRRGE