Gene Franean1_4874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4874 
Symbol 
ID5673214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5847139 
End bp5848497 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content69% 
IMG OID641243729 
Producthypothetical protein 
Protein accessionYP_001509145 
Protein GI158316637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.153139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCGCC GCATCTTCGG GCTGGAGAAC GAGTACGGCG TCACCTGCGT GTTCCGCGGG 
CAGCGAAGGC TGTCGCCGGA CGAGGTGGCC CGTTACCTGT TCCGACGCGT CGTGTCCTGG
GGCCGTAGCA GCAACGTGTT CCTCAAGAAC GGCGCCCGGC TCTACCTGGA CGTCGGCAGC
CACCCGGAGT ACGCCACCCC CGAGTGCGAC TCCGTGCCCG ATCTGGTGAC GCACGACAAG
GCGGGCGAGC GGATCCTCGA GGGCCTGCTC GTCGAGGCGG AGCGCCGGCT GCGCGAAGAG
GGCATCGCCG GGGACATCCA CCTGTTCAAG AACAACACCG ACTCGGCGGG GAACAGCTAC
GGCTGCCACG AGAACTACCT CGTGGGGCGG CACGGCGAGT TCAGCCGCCT GGCGGACGTG
CTGGTCCCGT TCCTGGTCAG CCGGCAGATC CTGTGCGGCG CGGGCAAGGT CCTTCAGACC
CCGCGCGGGG CGGTGTACTG CATCTCCCAG CGCGCCGAGC ACATCTGGGA GTCGGTGTCG
TCGGCGACGA CCCGCTCGCG TCCGATCATC AACACCCGCG ACGAGCCGCA CGCGGACGCC
GAGCGCTTCC GTCGGCTGCA CGTCATCGTC GGTGACTCGA ACATGAGCGA GACGACGATG
CTGCTCAAGC TGGGCTCCAC CGACCTGGTG CTCCGCATGA TCGAGGCGGG GGTCGTCCTG
CGCGACATGT CGCTGGAGAA CCCGATCCGG GCGATCCGCG AGGTGTCCCA CGACATGACC
TGCCAGCGCC GGATCAAGCT GGCGAACGGC CGTGAGGTGA GCGCGCTGGA CATCCAGCGC
GAGTACTACT CGAAGGCGGT CGAGTTCGTC GAGCGGCGCG GCGGGGACGC CGTGGCGAAG
CGGGTGCTCG ACCTGTGGGG CCGCACCCTG CTCGCGATCG AGACCGAGGA CCTGGAGCTG
GTCGCCCGGG AGATCGACTG GGTCACCAAG TTCGTCCTCA TCGACCGCTT CCGGCTCAAG
CACGGGCTGT CGCTGGCGTC GCCGCGGGTG GCCGAGCTCG ACCTGAAGTA CCACGACATC
CACCGTGACC GCGGGCTCTA CTACCGGATG GAGCGGGCCG GCCTGGTCGA GCGGGTCACC
CGCGACCTCG ACATCTTCGA GGCGAAGTCG GTGCCGCCGC AGACCACCCG GGCCCGGCTG
CGCGGGGAGT TCATCAAGCG GGCGCAGGAG AAGCGGCGCG ACTTCACCGT CGACTGGGTG
CACCTCAAGC TCAACGACCA GGCCCAGCGC ACGGTGCTGT GCAAGGACCC GTTCCGGTCG
GTGGACGACC GCGTCGACAA GCTGATCGCG AGCATGTAG
 
Protein sequence
MDRRIFGLEN EYGVTCVFRG QRRLSPDEVA RYLFRRVVSW GRSSNVFLKN GARLYLDVGS 
HPEYATPECD SVPDLVTHDK AGERILEGLL VEAERRLREE GIAGDIHLFK NNTDSAGNSY
GCHENYLVGR HGEFSRLADV LVPFLVSRQI LCGAGKVLQT PRGAVYCISQ RAEHIWESVS
SATTRSRPII NTRDEPHADA ERFRRLHVIV GDSNMSETTM LLKLGSTDLV LRMIEAGVVL
RDMSLENPIR AIREVSHDMT CQRRIKLANG REVSALDIQR EYYSKAVEFV ERRGGDAVAK
RVLDLWGRTL LAIETEDLEL VAREIDWVTK FVLIDRFRLK HGLSLASPRV AELDLKYHDI
HRDRGLYYRM ERAGLVERVT RDLDIFEAKS VPPQTTRARL RGEFIKRAQE KRRDFTVDWV
HLKLNDQAQR TVLCKDPFRS VDDRVDKLIA SM