Gene Franean1_4865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4865 
Symbol 
ID5673205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5837685 
End bp5838485 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content74% 
IMG OID641243720 
Producthypothetical protein 
Protein accessionYP_001509136 
Protein GI158316628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.04962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.390443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA GGCTGCTTGT CTTTGGCATG CTCGCAGGTT TCTTCGCCGG TCTGCTGGCT 
TTCGGGTTCG CGTCGATCAC CGGCGAGCCC CAGGTGGACG CCTCGATCGC CATCGAGGAG
GCGTCGGCGC CCCCGCCGGC TCCCGGTGAG CACGCCGAGG AGGAGGTCGT CTCCCGGAGC
ACCCAGAAGG GTCTGGGTCT CGCGGTCGCG ACCGGGGTGT ACGGCATCGC GATCGGTGGG
CTGTTCGCGA TCGCGTGCGC GGTCGCCTAC GGCCGCATCG GCACCGGCGG GATGCGGCCC
ACCGCCGCGG TGGTCGCGGT GGTCGGTTTC GTCGCGGTGG CCGTGGTGCC GTTCCTGAAG
TACCCGGCGA ACCCGCCGGC GGTCGGCAAC CCGGACACGA TCGACCGCCG GACCGGCCTC
TACGTCGTCA TGGTCCTGGT GGCGGTGCTC GCCGCGCTCA TCGCGGCCCA GGCCGGGCGC
CTGGTGTCGG CCCGTCTCGG CACCTGGAAC GCCGCGCTCG CGGCGGCGGC GGTGTTCGCC
GTGCTGGTGA CCGTGGCCGC GGTCGTCATG CCGGTGATCA ACGAGGTGCC GGCGTCCTTC
CCGGCCGAGC TGCTGTGGCG GTTCCGGCTG GCCTCGCTGG GCACCCAGGC GGTGCTGTGG
GCGACGCTCG GACTGGTGTT CGGGCCCCTC GCCCACCGGG TGCTGAGCCC GGCGCCGGCA
CCGGCGCGCC AGGCCGGCAC CGTCGCCCGC GCGGACGAGA CCCGCGCCTC CAGCCAGGCC
ACGGCGCCGT CGGCCGGGTG A
 
Protein sequence
MMRRLLVFGM LAGFFAGLLA FGFASITGEP QVDASIAIEE ASAPPPAPGE HAEEEVVSRS 
TQKGLGLAVA TGVYGIAIGG LFAIACAVAY GRIGTGGMRP TAAVVAVVGF VAVAVVPFLK
YPANPPAVGN PDTIDRRTGL YVVMVLVAVL AALIAAQAGR LVSARLGTWN AALAAAAVFA
VLVTVAAVVM PVINEVPASF PAELLWRFRL ASLGTQAVLW ATLGLVFGPL AHRVLSPAPA
PARQAGTVAR ADETRASSQA TAPSAG