| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4859 |
|---|
| Symbol | |
|---|
| ID | 5673199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5827217 |
|---|
| End bp | 5828062 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641243714 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001509130 |
|---|
| Protein GI | 158316622 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.239817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTCA CCGGGGATGA CGGCCAGGCA GCGCGGTGGA ACGGACCGGC CGGACAGGCC
TGGGCCGAGG CGCAGACCCT GACGGACCGG ATGTTCAAGC CGTTCGAGGA CCTGCTCGTC
GACGCGGTCT CGGCCACCGG TGCCGGGTAT GTGCTCGACG TCGGCTGCGG CACGGGCGCC
ACGACGGTCG CCCTCGCCCG GCGGCTCGGG GCGCAGGGGC GCTGCGTCGG CGTGGACATC
TCCGACCCGA TGCTCGCCGC CGCCAGGGCG CGGGCCGAGC GGGACGAGGA GGGGGCGCGG
GCGGTCTTCA TCCGCGCCGA CGCGCAGGAT CACGCGTTCG AGCCCGCCGC CTTCGATGCG
ATCGTCTCCC GTTTCGGGGT CATGTTCTTC GGCGACTCCG TCGCCGCCTT CGCGAACCTG
CGACGGGCCG CGAAGGACGG CGGCGAACTC CGCTTCCTCG CCTGGCGCGC GACCACGGAG
AACCCGTTCA TGACGACGGC CGAACGCGCT GCGGCCCCGC TTCTGCCAGG CCTTCCCGCC
CGCCAGCCGG ACGAGCCTGG GCAGTTCGCC TTCGCCGACC CGGACCGGGT CGAGCGCATT
CTGGCGGAGA GCGGCTGGGC CGGGATCGAC ATCCGGCCGG TCGATGCGTC CTGTGTGTTT
CCCGAACACG AGCTGGTCCC CTACTTCACC CGGTTCGGCC CGGTCGGTCA GGCCCTGCGG
GACGTGGACG AACGGACTCG CGCGCAGGTC GTCGAAACAG CCCGCGCCGC GTTCGATCCC
TATGTGCACG GCGCCGAGGT CCGTTTCACC GCGGCCTGCT GGATGGTCGG CGCCCAGGCC
AGGTGA
|
|---|
| Protein sequence | MNVTGDDGQA ARWNGPAGQA WAEAQTLTDR MFKPFEDLLV DAVSATGAGY VLDVGCGTGA
TTVALARRLG AQGRCVGVDI SDPMLAAARA RAERDEEGAR AVFIRADAQD HAFEPAAFDA
IVSRFGVMFF GDSVAAFANL RRAAKDGGEL RFLAWRATTE NPFMTTAERA AAPLLPGLPA
RQPDEPGQFA FADPDRVERI LAESGWAGID IRPVDASCVF PEHELVPYFT RFGPVGQALR
DVDERTRAQV VETARAAFDP YVHGAEVRFT AACWMVGAQA R
|
|---|
| |