Gene Franean1_4857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4857 
Symbol 
ID5673197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5825415 
End bp5826206 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID641243712 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001509128 
Protein GI158316620 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.341026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.253487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTC ACGACACCAC CCTGCCCGGC GCGCCCTGCT GGGTCGACCT CATGACCTCG 
GATGCGGCGA AGGCCCGCGA GTTCTACGCG GAGCTGTTCG GCTGGACCTC CGAGGAGCCG
AACGAGGCGT TCGGCGGCTA CTTCAACTTC TCCAAGGACG GCAAGGTGGT CGCCGGGGGG
ATGACGAAGC AGCAGCCGGA GCTGCCCGAC GTCTGGTCGG TCTACCTGCT GACCCCCGAC
GCGGAGAAGA CCGCCGCGGC CGTACCCGCG CACGGCGGAA CGATGATGAT CTCGCCGATG
CCGGTCGCCG ACCTGGGCGT CATGGCCGTC CTCACCGACC CGGGCGGCGC CGCGGTCGGT
ATGTGGCAGC AGGGCCTGCA CCGCGGCTTC GGAGTGCTGG CCGAGCCGGG CGCGCCGGGC
TGGTTCGAGC TGCTCACGCG GGACTACGCC GCCGCGGTCA CCTTCTACCA GGAGGTGTTC
GGCTGGAAGA CGAACGTTGT CAGCGACACG GACGAGCTTC GCTACACCGT GCTCGTCGAT
GACGCCGGCG AGCAGCACGC CGGGATCATG GACGCGTCAG GCTTCCTCCC CGAGGGCGTT
CCGGCGCACT GGGGCGTCTA CTTCGCCGTC GAGGACACCG ACGCGGCGCT CGCCCTCACC
GTCAAGCTGG GGGGCGCGGT CGTCCAGCCG GCCATGGACA CTCCGTATGG CCGTCTCGCG
ATCGCGACCG ACCCGACGGG GGCGACCTTC AAGCTGGTGG GGAAGAACAT CGAGGAGCCG
GCGAAGGACT GA
 
Protein sequence
MPAHDTTLPG APCWVDLMTS DAAKAREFYA ELFGWTSEEP NEAFGGYFNF SKDGKVVAGG 
MTKQQPELPD VWSVYLLTPD AEKTAAAVPA HGGTMMISPM PVADLGVMAV LTDPGGAAVG
MWQQGLHRGF GVLAEPGAPG WFELLTRDYA AAVTFYQEVF GWKTNVVSDT DELRYTVLVD
DAGEQHAGIM DASGFLPEGV PAHWGVYFAV EDTDAALALT VKLGGAVVQP AMDTPYGRLA
IATDPTGATF KLVGKNIEEP AKD