| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4855 |
|---|
| Symbol | |
|---|
| ID | 5673195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5823610 |
|---|
| End bp | 5824821 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641243710 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001509126 |
|---|
| Protein GI | 158316618 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.165345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.275978 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGACAC TCAAGGCCGC CGGCTTGCTC GATGTCGATA CCGGGGAGAT CACCCGGCCC
GGGATCCTGA AGATCGAGAA CGATCGGATC GTCGGTCTCG GCGGCCAGCC CGAGGGCGAG
GTCCTGGACC TCGGCGACCT GATCCTGCTG CCCGGCCTGA TGGACATGGA GCTCAACCTC
CTGATGGGCG GCCCCGGCGA GCACCCGCTC ACCGGGCAGA TGCGCGACGA CCCGCCACTG
CGGATGATGC GCGCCACCCA GAACGCCCGC CGCACCCTGC GAGCCGGCTT CACCACGGTG
CGCAACCTCG GCCTGTTCTG CAAGACCGGC GGCTACCTGC TCGACGTCGC ACTCATGAAG
GCGATCGACG CCGGCTGGGT CGACGGCCCG CGGATCGTCC CCGCCGGCCA CGCCATCACC
CCGACCGGCG GCCACCTCGA CCCCACCATG TTCGGCGCGT TCGCCCCGCA CGTCCTGAAA
CTCACCGTCG AGGAGGGCCT GGCCAACGGC GTCGACGAGA TCCGCCGAGC CGTCCGGCAC
AACATCAAGC ACGGCGCCCA GGTCATCAAG ATGTGCGGCT CGGGCGGAGC CATGTCCCAC
AGTGGGCCCT CGGGCGCGCG GCACTACTCC GACCAGGAGG TGCTGGCCCT CACCGACGAG
GCACACCGAC GCGGCCTACG CGTGGCGGCG CACACCCACG GCTCGGAAGC CGTCCGGCAG
ATGGTCGAAT GCGGCGTCGA CTGCATCGAA CACGCATTCA TGATCGACGA CGACACCATC
AACCTGCTGA TCAAGCGCGG CACCTGGGTG GTCGCCACCC AGGCCCTGAT CGACAACATG
CCGGTGCTGA ACGACGCCGA GCCGGAGATC CAGGCGAAGG CCGCCCTCAT CTTCCCCCGC
GCGAAGGCAT CGATCCGCAA CGCCATCGAG GCAGGCGTCA AGATCGCCGT CGGGAGCGAC
GCGCCGGCGA TCCCACATGG CAAGAACGCC CTCGAACTGG TCGCCCTGGT CGACCGGGGC
ATGACCCCGC TGCAGGCCAT CCAGGCCGCG ACCATCGTGG GCGCGGACCT CATCGACGTC
ACCGACCGCG GCCGGCTCGC CGAGGGCCTG CTCGCCGACG TCATCGGCGT GCGCGGCAAC
CCCCTCGAGG ACATCCGCGT CCTGCAGCGG GTCCCGTTCG TCATGAAGGG CGGCAAGCAG
TTTGTCTACT GA
|
|---|
| Protein sequence | MLTLKAAGLL DVDTGEITRP GILKIENDRI VGLGGQPEGE VLDLGDLILL PGLMDMELNL
LMGGPGEHPL TGQMRDDPPL RMMRATQNAR RTLRAGFTTV RNLGLFCKTG GYLLDVALMK
AIDAGWVDGP RIVPAGHAIT PTGGHLDPTM FGAFAPHVLK LTVEEGLANG VDEIRRAVRH
NIKHGAQVIK MCGSGGAMSH SGPSGARHYS DQEVLALTDE AHRRGLRVAA HTHGSEAVRQ
MVECGVDCIE HAFMIDDDTI NLLIKRGTWV VATQALIDNM PVLNDAEPEI QAKAALIFPR
AKASIRNAIE AGVKIAVGSD APAIPHGKNA LELVALVDRG MTPLQAIQAA TIVGADLIDV
TDRGRLAEGL LADVIGVRGN PLEDIRVLQR VPFVMKGGKQ FVY
|
|---|
| |