| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4848 |
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| Symbol | |
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| ID | 5673189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5813049 |
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| End bp | 5813645 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641243704 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001509120 |
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| Protein GI | 158316612 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00240786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.150096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGTTA CGAACGACGA CATCGCCAAG ACGATCAGTA CATATCTCGA TGTCTACCCG
GAGGATACGG AGCCCCTCGC CCCCCTGTTG GAAGCAGCCA GTGGAAGCGA TGCGCCGCTG
GCCTCCAGGA CAACCACACC CGGCCACGTT ACCTGCGGAG TGGTCGCAGT CACCCCTGAG
CGCCGGGTGC TCCAGATCCG ACACCGCAGC CTGGACCGAT GGCTGTTGCC CGGCGGGCAC
ATCGAGGCGG ACGACGACTC ACTCCTGGAC GCAGCGCTGC GGGAGCTGGC CGAGGAGGCG
GGTGTTCCCC GCGCCTGGGT GAGCCCGGTT CTCGACCGGC CTGTGGACGT GGACGCACAC
GTGATCCCGC CGAACCCCAC GAAGCTGGAG CCTGAGCACA CCCACTACGA CCTTCGTTTC
CTGCTGGCCG TCGCCCCTCC AGGTGGCGAC GCTGACGTGG TGCTGCAGCT GGAGGAGGTC
ACTGACTTCC GCTGGACCCC GCTGACCGAG CTGACCGGTC GCATCGGGGG TCGCGTCCGC
GCCATCCTCC TGACACGAGG ATTCCCGCAG AACGGGCTGG CCCCGGGGAA GGGGTGA
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| Protein sequence | MPVTNDDIAK TISTYLDVYP EDTEPLAPLL EAASGSDAPL ASRTTTPGHV TCGVVAVTPE
RRVLQIRHRS LDRWLLPGGH IEADDDSLLD AALRELAEEA GVPRAWVSPV LDRPVDVDAH
VIPPNPTKLE PEHTHYDLRF LLAVAPPGGD ADVVLQLEEV TDFRWTPLTE LTGRIGGRVR
AILLTRGFPQ NGLAPGKG
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