Gene Franean1_4844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4844 
Symbol 
ID5673185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5810125 
End bp5810976 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content71% 
IMG OID641243700 
Productbeta-lactamase-like protein 
Protein accessionYP_001509116 
Protein GI158316608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.653057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0750337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG CCACCGACCT GCCGATCTGC GTCACCTGCG GGGTGCAGTA CGCCGCGCCG 
CGACCGGACT GCCCGGTCTG CGAGGACGAG CGGCAGTACG TCGGCTGGGA CGGGCAGCGC
TGGACCACCC TCGGCGAGCT CCACTCGGAC GGCTTCCGCG GCCGGCTCGC ACCCGAGGGC
CCGGGCGTGT ACGGCATCGG TTCGGAGCCG AAGATCTCCA TCGGGCAGCG GGCCCTGCTC
GTCACCACGG CGAGCGGCAA CATCCTCTGG GACTGCGTAC CCCTCCTCGA CGACGACCTG
ATCGCTCAGG TCACCGAGCT CGGCGGAATC AGCGTCATCG CCGTGAGCCA CCCGCACTTC
TACGGCTCGA TGGTCGACTG GAGCCGCGCC TTCGGCGACG TCCCGATCTA CGTCCACGCC
GCCGACGAGC AGTGGCTCGG CCGCCGCTGC GCCGCCGTCA ACCTGTGGAC GGGCGACACG
CTCACCATCG GCGACGGGCT GACCCTCGTG AACGGCGGCG TGCACTTCGC CGGTGGCACC
GTCCTCCATC ACGCCGCCGG CGAGGACGGG CGAGGCGCCC TGTTCTCCGG GGACATCCTC
CAGGTCGTCC TCGACCGCAG GTATGTGAGC TTCATGTACT CGTACCCGAA CTACATCCCC
GAACGCCCGG AGACCGTGCG CCGGGCCGTG CGGCTGCTGG AGCCCTTCGC CTTCGAGGCG
ATCTACGGTG CGTTCTGGCA AACCGTCGTC CGCTCGGACG GGCACGCCGC CATGCACCGC
TCCGCCGAGC GCTACCTGCA CTTCGTCGCC GACCCCGTGC CAGAGGCGGC GGAACGGGCG
CCGCGGGTCT AG
 
Protein sequence
MDLATDLPIC VTCGVQYAAP RPDCPVCEDE RQYVGWDGQR WTTLGELHSD GFRGRLAPEG 
PGVYGIGSEP KISIGQRALL VTTASGNILW DCVPLLDDDL IAQVTELGGI SVIAVSHPHF
YGSMVDWSRA FGDVPIYVHA ADEQWLGRRC AAVNLWTGDT LTIGDGLTLV NGGVHFAGGT
VLHHAAGEDG RGALFSGDIL QVVLDRRYVS FMYSYPNYIP ERPETVRRAV RLLEPFAFEA
IYGAFWQTVV RSDGHAAMHR SAERYLHFVA DPVPEAAERA PRV