| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4828 |
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| Symbol | |
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| ID | 5673169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5767683 |
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| End bp | 5768669 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243684 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001509100 |
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| Protein GI | 158316592 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00770957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0433123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCT ATCTGTTCGG GCGGTTCCTG CAGGGGGCCT TCGTTCTCTG GGCCGCGTTC
ACGCTCTCGT TCGTCGTGCT GTACGCGCTG CCGAGCGATC CGGCGGCGAT CATGATCGGG
CCGAGTAACT CCCTCACCCC GGCCGAGCTC GCGGCCCGCC GGCACGAGCT CGGCCTGGAC
CGGTCCCTGT TCGCGCAGTA CTTCGGGCGG CTGGGCGACC TCCTCCACGG CGACCTGGGC
CGGTCGGTGC AGTCCGGTCA GCCGGTGCGG GAGCTGATCG GGGACGCCCT GCCGCAGACC
GCCGCCATCA CGGGGCTCGG CCTGGTGGTC GGGGTGGCGC TCGGCGTGGG TCTCGCGGTC
GCGGCGACGC TGACCCACCG GCGCTGGCTG CGCCAGACGC TGCTCACCCT CCCCCCACTC
GGCGTGGCCG TCCCGAGCTT CCTCGTCGGG CTCCTGCTGC TGCAGTGGTT CTCGTTTCGG
TGGCAGCTGT TCCCGGCCAT CGGCAACAGC GGCTGGCGCA GCCTGGTGCT CCCCGCCGTC
ACGATCTCGC TGCAGCCCGC CGCCCTGATC GCGCAGCTGC TGGCGCGGAG CCTGGACAAC
GAGCTGCGGC AGAACTACGT CGACCTGGCC AGGGCGAAGG GCGCCGGACC GGCGCGGGTG
AACGTCCGGC ACGCGCTGCG CAACGCCGCG CTGCCGGCGC TGACCATCGC CGGCATCCTG
GTCGGCGGAC TGCTGGCCGG CGCGATCGTG GTGGAGGTCG TGTTCTCCCG CAACGGCCTC
GGCCGGATCT CCCAGGCCGC GGTCGACAGC CAGGATCTGC CGGTGGTGCA GGGCGTGGTC
CTGCTCGGCT CGGCGGTCTT CGTCGCCGTC AACCTTCTCG TCGATCTGCT CTATCCGCTG
CTCGACCCCC GCATCGCCCG GGACGGGAGC GCGGCCCGCC GCGCTCCGGA GGCGGTCGCG
GTCGGTCCGG CCCCGTCCGT AACGTGA
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| Protein sequence | MTRYLFGRFL QGAFVLWAAF TLSFVVLYAL PSDPAAIMIG PSNSLTPAEL AARRHELGLD
RSLFAQYFGR LGDLLHGDLG RSVQSGQPVR ELIGDALPQT AAITGLGLVV GVALGVGLAV
AATLTHRRWL RQTLLTLPPL GVAVPSFLVG LLLLQWFSFR WQLFPAIGNS GWRSLVLPAV
TISLQPAALI AQLLARSLDN ELRQNYVDLA RAKGAGPARV NVRHALRNAA LPALTIAGIL
VGGLLAGAIV VEVVFSRNGL GRISQAAVDS QDLPVVQGVV LLGSAVFVAV NLLVDLLYPL
LDPRIARDGS AARRAPEAVA VGPAPSVT
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