| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4824 |
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| Symbol | |
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| ID | 5673165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5760202 |
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| End bp | 5762190 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641243680 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001509096 |
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| Protein GI | 158316588 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase
[COG1051] ADP-ribose pyrophosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0491634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTCCG CCAGGGGGGC GTCTTTTTCT GTCAGCGTGA CAAGAAGCTA TTCTCGCCGC
GTGGACGATG ATCCGTGGGA ACCTCCCGCC GTTATGGTCG CCGTCGACCT GGTGGTTCTT
ACATTGCGTG GGGCGAGCCT GCGGGTACTT CTCGTTGAAC GGGGAGTCGA GCCGTACCGA
AATTTCCTGG CGCTACCCGG AGGTTTTCTC GCCCATGCGG AGGAGGATCT GACCTCCGCG
GCCCGGCGCG AACTCTCACA GGAAACGGGG GTCGATCCGC GGCTGCTGCA TCTCGAACAG
TTCGGCGTCT ACGGAGAGCC GGGCAGGGAT CCGCGGGGCC GGGTCGTCTC GGTGGCCTAT
CTCGCGATCG AGCCACAGCT GCCCGAGCCA GTCGCCGGTA CGGACGCGAT CGGGGCGGGC
TGGCATCCGG TCGACCGGGT GCTCGCCGGG GACGTCACGC TCGCGTTCGA CCATCTCCAG
GTTGTCGCGG ACGGAGTCGA ACGAGCCCGT TCGAAGATTG AGCACTCGAC GCTGGCGACG
GCATTCTGCG CGCCCATCTT CACGATCGCG GAACTGAAGG ATGTATACGA GGCGGTGTGG
GGAGTACCCG TGGACCCACG GAACTTCTAC CGCAAGGTCC AGAAGACCGG CGGATTCATA
GTCTCCGCCG GCGCGACACG GCGGACGGCA GGCGGGCGCC CGGCCCGGCT CTTCAGAGCC
GGCCCGAGCG CTGTGCTCTC GCCGCCGCTG TCCCGACCGG CGGTCTCTCC GGGGAGTCCT
GGAACGGCCA GCGCAATGCA CACAGAGGGG GGAACCCGAA TGAGTCGGCG ACCAGTCGTG
ATTCTCACGG CACTCGATCT GGAATATCAA GCGATCCGTG AGAGCCTTGT CGACCCGCGC
CTGCACCGCC ATGACCAGGG CACTCGATTC GAACTCGGAC GGCTGGCCGG AGGCAGCTGC
CGGATCGCCC TCGCCCATGT CGGTAAGGGC ACCCATCCGG CCGCCGTGCT GGCCGAGCGC
GCGATCGCCG AGTTCGCCCC GGCGGCGCTG CTCTTCGTGG GGGTCGCGGG TGCCCTGCAC
GGACACATAG CCCTGGGCGA CGTCGTTGTG GCGACCCACG TGTACGCGTT CCACGGCGGT
ACCGGCGAGG ACGACGGGTT GAAGGCACGG CCCCGTGTCT GGGAGACCTC GCACGCGGCC
GACCAGATCG CTCGGCACAT TCACCGGACG GGTTCCTGGG CGCAGCGGCC AGGAGCTCCC
GCCATGCTGC CCGACGTGCA CTTCGGACCG ATCGCCGCCG GCGAGGTCGT GCTGAACTCC
AGGGTCTCCG GACTCGCCCG CTGGATACGT GAGCACTACA ACGACGCCCT GGCGATCGAG
ATGGAGGGGG CCGGCGTCGC GCAGGCCGGG CACCTGAACC GGGCGCTGCC GGTCGTCGTG
ATCCGTGGTG TCAGCGACCG CGCCGACGGG ACCAAGGAGT CCACGGACCG CCAGCGGTGG
CAGCAGCGCG CGGTCGCCAA CGCGGCACTG TTCGCGACGG CACTGGCCGA GGAGATTTCC
GCAGAGGACG ACGGCGCCGG ACGCCCGGCA GCGAAATCAA CGAAAGGAGC CGCAGTGCGC
GAGTACGTTC AGAGCGTTCA CAACGAGAAC TCCGGCAGCG GGCCGGTGGG TGTACAGGCC
CACACCGTGC ACGGCGGTGT CGTGCACGTC ACCGGCGGCG CTCGCCCGCC GGTCGACCTC
CCGATGGCCC TCGCGGAGAT ACGCACGCGG TTCCAAGCAG CCCGGGCGGC CGGTGCGGTG
GACGAGGACA CCTACGCCGC CGCGGAGGCG GAGCTCGCGG TGGCCGAGGA GGCCCTCAAA
GCGGACACGC CACAGAGCCA CAGCACGTTG CGGGTGGCGC TGAAGAAGCT CAAGGGGCTT
GTCGGTGACG TGTCCGATCT CGCCGCGAAG ATCACGATTG TCCTGGCGCT TGCCCGGAAT
TTGCCATGA
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| Protein sequence | MTSARGASFS VSVTRSYSRR VDDDPWEPPA VMVAVDLVVL TLRGASLRVL LVERGVEPYR
NFLALPGGFL AHAEEDLTSA ARRELSQETG VDPRLLHLEQ FGVYGEPGRD PRGRVVSVAY
LAIEPQLPEP VAGTDAIGAG WHPVDRVLAG DVTLAFDHLQ VVADGVERAR SKIEHSTLAT
AFCAPIFTIA ELKDVYEAVW GVPVDPRNFY RKVQKTGGFI VSAGATRRTA GGRPARLFRA
GPSAVLSPPL SRPAVSPGSP GTASAMHTEG GTRMSRRPVV ILTALDLEYQ AIRESLVDPR
LHRHDQGTRF ELGRLAGGSC RIALAHVGKG THPAAVLAER AIAEFAPAAL LFVGVAGALH
GHIALGDVVV ATHVYAFHGG TGEDDGLKAR PRVWETSHAA DQIARHIHRT GSWAQRPGAP
AMLPDVHFGP IAAGEVVLNS RVSGLARWIR EHYNDALAIE MEGAGVAQAG HLNRALPVVV
IRGVSDRADG TKESTDRQRW QQRAVANAAL FATALAEEIS AEDDGAGRPA AKSTKGAAVR
EYVQSVHNEN SGSGPVGVQA HTVHGGVVHV TGGARPPVDL PMALAEIRTR FQAARAAGAV
DEDTYAAAEA ELAVAEEALK ADTPQSHSTL RVALKKLKGL VGDVSDLAAK ITIVLALARN
LP
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