| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4813 |
|---|
| Symbol | |
|---|
| ID | 5673154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5746233 |
|---|
| End bp | 5747327 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641243669 |
|---|
| Product | alkanesulfonate monooxygenase |
|---|
| Protein accession | YP_001509085 |
|---|
| Protein GI | 158316577 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03565] alkanesulfonate monooxygenase, FMNH(2)-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0820217 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGA CCTTCCACTG GTTCCTGCCC ACCTCCGGCG ACGCGCGCGA CGTGGTCGGC
GGCGGGCACG GCGCACCCGC CACGGCGAGC ACCCGCGGCC GGCCGCCGAC ACTTGAGTAC
CTCGGCCAGA TCGCCCGCTC GGCCGAGCAG CTCGGTTTCG CCGGCGCCCT GACCCCCACC
GGTTCGTGGT GCGAGGACGC CTGGCTGACC ACGGCGATGC TGGTCGAGGC GACGAAGCGG
CTGAAGTTCC TGGTCGCCGT ACGGCCGGGG CTGGTCTCAC CGACGCTGGC CGCGCAGATG
GCGTCCACGT TCCAACGGCT CTCCGGTGGG CGGCTGCTGC TCAACGTCGT CACCGGCGGC
GAGGCGGACG AACAGCGCGG CTACGGCGAC TTCCTCGACA AGGACGACCG GTACGCCCGC
TGCGACGAGT ACCTGTCGGT GCTCTCCGAT CTGTGGCGGG GACGGACCGT GGACGTCGAC
GGCCGCTTCG TGCGGCTGAG CGGGGCGCGG CTGTCGCGGC TCCCCGACCC GCCGCCGGAG
ATCTACTTCG GGGGCTCGTC GCCGGCCGCG GTCGAGGTGG CCGCGCGCCA CGCCGACGTC
TACCTGACGT GGGGCGAACC GCCGGACGCC GTCGCCGCCA AGTTCGCCGA GGTCCGGTCC
AGGGCCGAGG CGGCCGGGCG GGCGCCGCGT TTCGGGCTGC GCGCCCACGT CATCACCCGG
GACACCGCCG AGGACGCCTG GGCGGCGGCG CACCGCCTGA TCGCCGGCCT GGACGCCCGG
ACGGTCGCGG CGGTGCAGGA GCAGCTGGCG CGCAGCGAGT CCGAGGGCCA GCGCCGGATG
CTCGCGCTGC ACAACGGGTC GACCGCGAAG CTGGAGATCT TCCCGAACCT GTGGGCGGGG
ATCGGGCTGG TCCGCGGCGG CGCCGGGACC GCCTTCGTCG GCAGCCACCA CGAGGTGGCG
GACCTCATCG AGACCTACCA CCAGGTCGGC GTCACCGAGT TCGTGCTCTC CGGCTATCCC
CACCTGGAGG AGGCGTACTG GTTCGGGGAG GGTGTGCTCC CGATCCTGCG CGCCCGGGGC
CGATGGTCCC CGTGA
|
|---|
| Protein sequence | MSLTFHWFLP TSGDARDVVG GGHGAPATAS TRGRPPTLEY LGQIARSAEQ LGFAGALTPT
GSWCEDAWLT TAMLVEATKR LKFLVAVRPG LVSPTLAAQM ASTFQRLSGG RLLLNVVTGG
EADEQRGYGD FLDKDDRYAR CDEYLSVLSD LWRGRTVDVD GRFVRLSGAR LSRLPDPPPE
IYFGGSSPAA VEVAARHADV YLTWGEPPDA VAAKFAEVRS RAEAAGRAPR FGLRAHVITR
DTAEDAWAAA HRLIAGLDAR TVAAVQEQLA RSESEGQRRM LALHNGSTAK LEIFPNLWAG
IGLVRGGAGT AFVGSHHEVA DLIETYHQVG VTEFVLSGYP HLEEAYWFGE GVLPILRARG
RWSP
|
|---|
| |