Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4810 |
Symbol | |
ID | 5673151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5742075 |
End bp | 5743742 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641243666 |
Product | major facilitator transporter |
Protein accession | YP_001509082 |
Protein GI | 158316574 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.502996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGT CCGGTGTGGA CTTCGCTGTC ACCGATGAGG TGCGCGACAG GTCCGCGGGT GCGGGGCTGT GGTTCGGCGG GCGGTCCGGC GCCCGTCGCG GAAGGAACCA GATGACGAAG GCCCAGGCCA CAGAGATGGA TCCAGCCGGC GCGAGCGGCG GGGACGGCGA TGCCCGGGCC ACCGGGGCAC CGCCGTCCAG CACCGTGGCG GCGGTGGACG AGGCGGGCGT CGATCCGCGG CGGTGGCGGG CGCTGCCCGT GATCCTGATC GCCAGCTTCA TGAGCCTGTT CGACGTCTTC GTCGTCAACG TCGCGGCACC GAGCATCGAA TCGGACCTGC ACGCGTCCAA CGCCGGGCTT GAGCTGGTCG TCGGCGGCTA CTCGTTCACC TACGCCGCCG CGCTGGTCAC CGGCGGCCGG CTGGGTGACC GGTTCGGCCG CCGCCGGATC TACCTGCTCG GGATGGCGGT CTTCACCGCC GCGTCGGCCC TGTGCGGGCT CGCGCCCAAC GAGGCGGTGC TGATCGGCGG CCGGCTGCTG CAGGGCGCCG GTGCCGCGGC CATGGTGCCC CAGGTGCTCG CGCTGATCAG CGTGACCTTC CCGCCGGCCG AGCGGCCGCG GGCGTTCGCG TTCTTCGGCG TGACGATCGG GCTCGGCGGG GTCTGCGGTC AGGTGCTCGG CGGGGTGCTG CTCGACCTCG ACATCTTCGG CCTCGACTGG CGGCCGATCT TCCTGGTCAA CGTGCCGATC GGGCTGGCGG CGCTCGTCGG GGCGCGGCGG CTGGTCCGCG AGTCGCGCGC GGCTCGAGCG GAGCGGCTCG ACCCGGTCGG GCTGGGCACG CTGACCCTCG GCATCGGGCT CGTCCTCATC CCGCTCACCC TCGGCCGCGA CGAGGGCTGG CCGCTGTGGA CGTGGCTCGC GCTCGCCGCT GGGATCGTGG TGCTCGGCGG GTTCGGGGCC TGGGAGGCCC GGCTGGCGCG CTCCGGCGGG CATCCGATCA TCCCGCCGGC CGTGGTGCGG TCCCGGGCGG TCGTCGGCGG CATGGTGATG AGCGCGGGGT ACTTCTTTTT CTTCGGCAGC TTCCTACTCG CCCTGACGAT CTTCCTGCAG GTGGGCCAGC ACCGCTCCCC GCTGAACGCC GGGCTGATGT TCGCGCCGCT CGGCGTGGTC TTCGCGTTCT CCTCGCTGGC GGCGCGCCGG CTGGTCACCG TGTACGGGCC GCGGGTGCTG ACCGCCGGGG CGCTCACCAC CGCCCTGTCC CTGGTCGGGG TCGCGGTGGC GGTGTCGGTC GAGGGCACCG GCATGACCGC CTACGAGCTC ACCCCGCTGC TGATGCTCGC CGGCATCGGC AACGGCCTGG TGATCCCGGC CCTGGCCGCG AGCGTCATGG CGGCCGCCCC ACCCGACATC AGCGGGACGG TGAGCGGCGT CCTCACCACC ACGCAGCAGT TCGCCTCGGC GTTGGGCGTC TCCGGCGTGG GGGCACTCTT CTTCGCCGAG ACCGCACGCA GCGGCGCGGA CGCCGGCCTC TTCGCCGCCG TCATCTGCGG CCTCATCTCG GTCGGCGCGG CCTTCCTGGG CTCCCTGGTT CTCCGCCGCC CACCCACGGC ACTGGCCGTC GCGGGGGCCG CCGTCGCCGG GGCTGCCGTC GCGGCATCCG CGGACTAG
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Protein sequence | MPTSGVDFAV TDEVRDRSAG AGLWFGGRSG ARRGRNQMTK AQATEMDPAG ASGGDGDARA TGAPPSSTVA AVDEAGVDPR RWRALPVILI ASFMSLFDVF VVNVAAPSIE SDLHASNAGL ELVVGGYSFT YAAALVTGGR LGDRFGRRRI YLLGMAVFTA ASALCGLAPN EAVLIGGRLL QGAGAAAMVP QVLALISVTF PPAERPRAFA FFGVTIGLGG VCGQVLGGVL LDLDIFGLDW RPIFLVNVPI GLAALVGARR LVRESRAARA ERLDPVGLGT LTLGIGLVLI PLTLGRDEGW PLWTWLALAA GIVVLGGFGA WEARLARSGG HPIIPPAVVR SRAVVGGMVM SAGYFFFFGS FLLALTIFLQ VGQHRSPLNA GLMFAPLGVV FAFSSLAARR LVTVYGPRVL TAGALTTALS LVGVAVAVSV EGTGMTAYEL TPLLMLAGIG NGLVIPALAA SVMAAAPPDI SGTVSGVLTT TQQFASALGV SGVGALFFAE TARSGADAGL FAAVICGLIS VGAAFLGSLV LRRPPTALAV AGAAVAGAAV AASAD
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