| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4789 |
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| Symbol | |
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| ID | 5673130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5716390 |
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| End bp | 5717370 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641243645 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001509061 |
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| Protein GI | 158316553 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.232227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCTC GGGTAGTGAA GCGGGCATAT CGTTATCGCT TCTACCCGAA TCCCGAGCAG
GTCGCGCAGC TGGCTCGTAC CTTCGGCTGT GTCCGCTACG TCTACAACCG GGCGCTGGCC
GAACGGTCCC GCGCCTGGAC CCAGGAGCAG CGCAGGGTCA CGCACGCGGA GACCGACAGG
ATGCTCACCG TGTGGAAGCG GGACACGGAG ACGGCGTGGC TGGCCGAACC GTCGAAAGGG
CCACTGCAGG CCGCGCTGCG CCATCTGCAG GCGGCGTTCG TGAAATTCTG GGAAAAACGG
GCCGGATATC CGTCTTTCAA GAAGAAGGGC AGGAGCCTCG ATTCGGCGAC CTATTTCCGG
AACTGCTTCA CCTACCGGAA CGGGAACATC ATACTGGCCA AGCAGGACCG GCCGTTGGAC
ATCGTCTGGT CGCGTCCGCT GCCCGACAGC GCAGCGCCCT CGCGGGTGAC GGTGTCGCGG
AACGCCCGCG GCCAGTACCA CGTCTCGATC CTGGTCGAGG ACACCGTCAC CAGCCTCCCG
CCGGCTGGGG GGCAGGTCGG GATCGACGCG GGCATCACAG CGCTGGTCAC CTTGTCGACC
GGGGAGAAAG TCACCAACCC CCGGCACGAG CGCCGCGACC GTGTCCGGCT GGCGCGGGCG
CAGCGGGACC TGTCCCGCAA GGCGAAGGGC TCGGCGAACC GGGTGAAGGC CCGCGTGAGG
GTCGCGGAGA TTCACGGCAG GATCGCGGAT CGGCGCCGGG ATCATCTGCG CAAGCTGTCC
ACGAGGATCA TCCGCGAGAA CCAAACGGTG GCCGTCGAGG ACCTGTCCGT CCGCACCATG
GTCCGCAACC ACTCGCTGGC CCGTGCTATC TCCGACGCAT CCTGGTCGGA GTTGCGGGCG
ATGGTGGAGT ACAAAGCCGA CTGGTACGAC GGAACATTCT GGCCTCGGGG CTCGCGGTGT
CCGCCTGTGG AGATGGAGTG A
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| Protein sequence | MGSRVVKRAY RYRFYPNPEQ VAQLARTFGC VRYVYNRALA ERSRAWTQEQ RRVTHAETDR
MLTVWKRDTE TAWLAEPSKG PLQAALRHLQ AAFVKFWEKR AGYPSFKKKG RSLDSATYFR
NCFTYRNGNI ILAKQDRPLD IVWSRPLPDS AAPSRVTVSR NARGQYHVSI LVEDTVTSLP
PAGGQVGIDA GITALVTLST GEKVTNPRHE RRDRVRLARA QRDLSRKAKG SANRVKARVR
VAEIHGRIAD RRRDHLRKLS TRIIRENQTV AVEDLSVRTM VRNHSLARAI SDASWSELRA
MVEYKADWYD GTFWPRGSRC PPVEME
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