| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4785 |
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| Symbol | |
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| ID | 5673126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5710769 |
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| End bp | 5711584 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243641 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001509057 |
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| Protein GI | 158316549 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.446452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.392009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGC TCGACGGCAA GGTCGCGTTC ATCACCGGCG CCGCCCGAGG CCAGGGCCGC
AGCCACGCGG TCCGGTTAGC GCAGGAGGGT GCCGACATCA TCGCGGTGGA CATCTGCGCC
CAGATGGAGT CGGTGCCTTA CCCGATGGCG ACTCCGGACG ACCTCGAGCT GACCGTGAAG
GCGGTCGAGG AGACGGGACG GCGGATCGTC GCCCGGCAGG CTGACGTCCG CGACGTGTCG
GCGCTGGGGA AGGCGTTCCA GGACGGCGTC GCCGAGCTGG GCCCGGTCGA CATCGTGCTG
GCGAACGCCG GTATCGGGCC GGGCGGGGCG GCGTCGGAGG ACGAGCAGTG GGAGGACGTC
GTCGGCGTCA ACCTCACCGG TGTGTGGAAC ACCGGCCGGG TGTCGATCCC GTCGATGGTC
GAGCGGGGCC AGGGTGGGGC GATCGTGCTT ACCAGCTCCA CTGGCGGCCT GATCGGTGTG
GGTATCCCGA CGGCGGGTTT CCTGGGTTAC ACCGCGGCCA AGCACGGCGT CGTCGGACTC
ATGCGGTCGT GGGCCAACTA CCTGGCGCCG CACAACATCC GGGTGAACAG CGTCGCCCCC
ACCACCGTGA AGACGCCCAT GGCCGCGAAC GGGGACCTGT CGGTCATCAC GGCGGGGTCC
CCGGAGCTCG CGCGGGTGCT GGCCAACGCG ATGCCCGTCG ACGCGGTGGA CCCGCTGGAC
GTCTCGAACG CCATCGCCTG GCTGGTGTCG GATGACGCCC GGTACGTGAC CGGCACCGTC
GTCCCGGTCG ACGCGGGCCA GTTGAACAAG CGGTAA
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| Protein sequence | MGKLDGKVAF ITGAARGQGR SHAVRLAQEG ADIIAVDICA QMESVPYPMA TPDDLELTVK
AVEETGRRIV ARQADVRDVS ALGKAFQDGV AELGPVDIVL ANAGIGPGGA ASEDEQWEDV
VGVNLTGVWN TGRVSIPSMV ERGQGGAIVL TSSTGGLIGV GIPTAGFLGY TAAKHGVVGL
MRSWANYLAP HNIRVNSVAP TTVKTPMAAN GDLSVITAGS PELARVLANA MPVDAVDPLD
VSNAIAWLVS DDARYVTGTV VPVDAGQLNK R
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