Gene Franean1_4770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4770 
Symbol 
ID5673112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5695840 
End bp5696757 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content74% 
IMG OID641243627 
Productalcohol dehydrogenase 
Protein accessionYP_001509043 
Protein GI158316535 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGT CCACCTTCCG CACCGCTGTC GTGCGCACCC CGGGCGGACC CGGCTCGATC 
GAGATCATTG ACGTTCCCGT TGCCGAGCCC GGGCCCGGCG AGGTCCGGGT CGAGATCACC
GCTGCGCCGG TCAACCCCGT CGACCTCGGG GTCGCGGGCG GCTTCTTCCA CACCATGGGG
CTGATCAACC AGCCGGAGCG TACCGGCCTG GGTTGGGACT TCGCCGGCAT CGTCGTAGCC
ACCGGCCGCG GCGTGGACCT GGCTGTCGGT ACCCGGGTCG CCGGTCTGGT GGTTGGGTTC
GACCGCGACT TCGGCACCTA CGCCGAGCAG CTCGTCGTGC CGGCCGCCGA CCTCGCCGTC
GTGCCCGACG GGCTGGACCT GGTTGCGGCG TCGACGGTGC CGCTCAACGG GCTGGCGGCG
GCGCAGATCG TCGACCTGCT CGGCGACGCA CCCACCGGCG GTAACCGGCT GCTGGTGACC
GGGGCGGCCG GCGCGGTCGG GGGGTACGTC GCCTCGCTCG CGCAGGACCG CGGCTGGCGG
GTGACCGGCC TGGCCCGAGC CGAGGACGAG GAGTTCGTCC GCAGCCTCGG CGCCGGTTTC
ACCACACACG CCGAGTCGGG CTGGGACGCG GTCGCCGACG GTGCCGTCCT GCAGGAGCAG
GGTCTCGCCC TGGTCCGCGA CGGCGGGGCG TTCGTCGGCG TCCGGCCGAA CGCCATGCCG
GCCACGGAGC GCGGGATCAC CGTAGCCGTC GTGGGAACGC ACCCCGACGG CCCGCGATTG
GGCGACCTGC TCGCCCGCAC CGCGTCCGGT GAACTACCGG CCCGAGTGCA CGCGGTCGTG
CCGCTGGATC AGGTCGCCGA CGCCCACCGG GCCATGGCGA AGGGTGGGGT GCGCGGTCGC
TACGTGCTCC AGCCCTGA
 
Protein sequence
MSMSTFRTAV VRTPGGPGSI EIIDVPVAEP GPGEVRVEIT AAPVNPVDLG VAGGFFHTMG 
LINQPERTGL GWDFAGIVVA TGRGVDLAVG TRVAGLVVGF DRDFGTYAEQ LVVPAADLAV
VPDGLDLVAA STVPLNGLAA AQIVDLLGDA PTGGNRLLVT GAAGAVGGYV ASLAQDRGWR
VTGLARAEDE EFVRSLGAGF TTHAESGWDA VADGAVLQEQ GLALVRDGGA FVGVRPNAMP
ATERGITVAV VGTHPDGPRL GDLLARTASG ELPARVHAVV PLDQVADAHR AMAKGGVRGR
YVLQP