| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4759 |
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| Symbol | |
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| ID | 5673101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5683830 |
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| End bp | 5685503 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243616 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001509032 |
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| Protein GI | 158316524 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.805923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC TCCGTGGCGT CACGGGCGCC ACACACGGTT TGCGGCGTTC GACCGTTTCG
GGCCGTACGC CGCAGTTGTT GTGGTGCGCG GCCGTCGCCG CCGTGGTGCT TTTTGCGCTG
GAGGTCGCCC TCGCGGTGCT GTTGGGCCCG CGGCCGGGCG TCGTCGCCAC GATGTCGCTC
AACGCCGCCG CCCAGGTGGC CGCCGCGGCG GCCTGCTTCT GGACCGCTCG GCGCACCCGC
CCCGGTGACC GGCGCTGGCG GCGGCTCATC GGCGTCATGG CGGGCAGCTC GGCGCTCGCC
AGCGTCGCGA CGGCGGCAGC CGTGCTGGGT GGTGAATCTC CCCGGGTGTC CTCGGGGTGG
TACGCCGTCC TGCTCGTTTT CCACGGTGTG GCCCTGGCCG GGCTGCTGTC GCTGCCCACC
GACCCGGTGG ACGGCCGGGC GGGGAGGCAG GGCCGCGGCT CGTCCCGCTG GTACGTGATC
ACCATGCTGG ACTGTGTACT GATCGTCGGT TCGATCGTCC TGCTGGAATG GGGGACGGTG
CTCGCCGCGG TCGTCCGGAC AGGTGCGCCC AACCTCAGAG AGTTCCTGCT CTCCCTGGTC
CACGCGGTCT CCGTACTGAT CCTGGTCACG GCGGTGGTGC TGATCGCGAG CTTCCGCCGG
CCGCGCTCCC CGACGACGTT GGCACTGCTC GGCACAGGTC TGCTCGCCTA CGGTCTCACC
AGCAACGTCT TCGTCTACCG CGTCGCGCAG CACCAGCTCG ACATGCCGCC GTTGAGCGTG
GTCGCATTCG GCCTCGCCTT CCTGCTGGTC TTCCTTGCCG CGCTGCTGCC GTTCCCGGCT
CGCGCACCGC CGGACGGCCC GGCGCTGGAC GGCCCGGCGC CGGCCGGGCC GCAGGCGACG
TGGGCGTACG TGGTGCTGCC CTACGCGGTG CTCGGTGCGG CGGGCCTGCT GGTGGTCGGC
AAGCTGTCGA TCGGTACGCA GGTCGACCGG TTCGAGACGT ACGGCATCGC CGGGCTGCTG
CTGGTCGCGC TGGTCCGCCA GATGGTCACG CTGGTCGAGA ACGCCCGGCT ACTCACCGGA
ATCCGGGACC AGGAACGGGA GCTGCACCAC CAGGCCTTCC ACGACCCGCT GACCGGCCTG
GCGAACCGGG CCCTGTTCAC CCGCCGACTA CAGCGAGCAC TCACGCGCGC CACCGACGAC
GCCGGTGACG CCAGCGACGC CGGTGGCGGC ACGTCGCTGT CCGTGCTGTT TCTGGACCTT
GACGAGTTCA AGCACATCAA CGACACCTTC GGGCATGCCG CCGGGGACGA GCTCCTCCGG
ATCAGCGCGG AGCGGCTGCG GGCGGGAACA CGGACCGTGG ACACCGTCGC CCGGCTCGGC
GGCGACGAGT TCGCCGTCAT CCTCGACGGC GACGGACTCC GCAATCCCCG CCGTGTCGGG
GAGCGGCTCG CGGCAGCGAT ACAGGCACCG TGTCTGCTGG CGGGACGGCC TTACACCCCG
CGAGCCAGCC TCGGACTGGT CACCCTCGAC TCCCCCGCCC GCCCGGCCGA CCCCGACGTC
CTGCTCCACC AGGCCGACCT TGCGATGTAC GCGGCCAAAC GCGAACGGGC CGGCAGGCTG
AAGGTCTACC GGTCGGACAT GAGCCCTCCG ATCGCCGCAC CGCCGCCCGG CTGA
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| Protein sequence | MSELRGVTGA THGLRRSTVS GRTPQLLWCA AVAAVVLFAL EVALAVLLGP RPGVVATMSL
NAAAQVAAAA ACFWTARRTR PGDRRWRRLI GVMAGSSALA SVATAAAVLG GESPRVSSGW
YAVLLVFHGV ALAGLLSLPT DPVDGRAGRQ GRGSSRWYVI TMLDCVLIVG SIVLLEWGTV
LAAVVRTGAP NLREFLLSLV HAVSVLILVT AVVLIASFRR PRSPTTLALL GTGLLAYGLT
SNVFVYRVAQ HQLDMPPLSV VAFGLAFLLV FLAALLPFPA RAPPDGPALD GPAPAGPQAT
WAYVVLPYAV LGAAGLLVVG KLSIGTQVDR FETYGIAGLL LVALVRQMVT LVENARLLTG
IRDQERELHH QAFHDPLTGL ANRALFTRRL QRALTRATDD AGDASDAGGG TSLSVLFLDL
DEFKHINDTF GHAAGDELLR ISAERLRAGT RTVDTVARLG GDEFAVILDG DGLRNPRRVG
ERLAAAIQAP CLLAGRPYTP RASLGLVTLD SPARPADPDV LLHQADLAMY AAKRERAGRL
KVYRSDMSPP IAAPPPG
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