| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4753 |
|---|
| Symbol | |
|---|
| ID | 5673095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5675616 |
|---|
| End bp | 5677280 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641243610 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein |
|---|
| Protein accession | YP_001509026 |
|---|
| Protein GI | 158316518 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.254581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGC ATGAGACGTA CGACGTGGTG GTTCTGGGGT CAGGCGCGGC GGGGCTCACC
GCGGCGCTCG CCGCGGCCGT GGAGGGTGCC CGCGTCGCCG TGTTCGAGAA GGCGGAGCTG
CTCGGCGGCA CGACCGCGCT GTCCGGCGGG ACGATCTGGG TCCCCGCCAA CCAGCCGGCC
CGGGCGGCCG GCATCAAGGA TTCCCGCGCG GACGGCCTGG CGTACCTGGC GAGTCTGTCG
AACGGGATGA TTCTCCCGGA GCTGGCCGAG GCGCTCGTCG ACGGCGGTCC GGAGCTGGTC
GACTTCGTCG AGCAGCAGAC GGATCTCCGT TTCCACCTGG TCGAGGGCTA TCCCGACTAT
CACCCGGAAC GTCCCGGCGG CCTGCCCCGC GGGGGACGGT CGATCGAGGT CGGCCTCTTC
TCCTTCCTCG GGTTCGAGGA ATGGGAGGAC CGCATCGCGG GCGACACCCG CCGGCTGCTC
ATCCGCGAGA TGCCCCTGGG CGGGGGCACC GGCGCGCTGG AGCTGGACGT GCTCGCCGAG
CGGGAGAAGA ACCGCGCGGA GGGCCTCGGC CGGGCGCTGG TCGGCGGTCT GCTCCAGGCC
TGCCTGCGGC GTGGGGTGCA CGTCGCCACC CGGTCGCGCG GCCTGAGGTT GGTCACCGGT
GACGGCGCCG TCACCGGGAT CGAGATCGCG ACCCCCGACG GCACCCGGTC GGTGCGCACG
GGCGCGGTCG TGCTCGCCAC CGGCGGCTTC GAGTACGACG CCGATCTCGT CCGCGACTTC
CTGCGCGGGC CGCTGACCCG GGCCATCGGC GCGCCGTCCA ACACGGGGGA CGGGCTGCGC
ATGGCGATGC GGGTCGGCGC CCAGCTCGGC AACATGCGGG AGGCCTGGTG GGCCCCGGTC
GTCAGCCTTC CCGGGCATCG CCGTGACGGC GCCCGCAACG GTCTGCTGAC CGCCCGGGAG
CGCGCACTGC CCGGTTCGAT CATGGTCAAC GGCCACGGCC GCCGGTTCGC CAACGAGGCG
GCGAACTACA ACGCCTTCGG CGGCGCCTAC CACCAGCTCG ACGCGTCGAA GTTCGAGTAC
CCGAACCTGC CGAGCTACCT GATCTTCGAC CAGTCGACCG TCGACCGGTT CGGTGTCTTC
GGCGGGGCGC CCGGCGGCGT GGTGCCGGAC TGGCTGGAGC GCGCGGACAC CCTGGACGCG
CTGGCGGGTC GGCTCGGCCT GCCCGCGGCC GAGGTCGCGG CGACCGTGCG GCGGTTCAAC
GAGCATGCCC GTGCCGGCAC CGACCCCGAC TTCGGCCGCG GCGACAACGC CTACGACCGG
TTCCCCGGCG GCCGGGTGCT CGATCCCGAA TCGGTCCTCT CCACGCTGGG CCCGGTCGAG
ACCGCGCCGT TCTACGGCGT CGAGGTCGGG TCGTCGGCGC TCGGCACCAA AGGCGGGCCC
CGGACCGATC GGGAGGGCCG GGTCCTGGAC GTCGACGGCG ACGTGATCCG CGGGCTCTAC
GCCGCGGGGA ACGTGATGGC GAGCCCGTCC GGCATGGTGT ACGGCGGTGC CGGGGCGACA
CTGGCCGTCG CCGGGGTGTG GGGTCTCTAC GCCGGGCGCG CGGCGGCGCG CGACCCGGCG
TCCGGCGCCC GGTCGCCGGT CCTGAGTGAA CGATCCGGAA GCTGA
|
|---|
| Protein sequence | MDEHETYDVV VLGSGAAGLT AALAAAVEGA RVAVFEKAEL LGGTTALSGG TIWVPANQPA
RAAGIKDSRA DGLAYLASLS NGMILPELAE ALVDGGPELV DFVEQQTDLR FHLVEGYPDY
HPERPGGLPR GGRSIEVGLF SFLGFEEWED RIAGDTRRLL IREMPLGGGT GALELDVLAE
REKNRAEGLG RALVGGLLQA CLRRGVHVAT RSRGLRLVTG DGAVTGIEIA TPDGTRSVRT
GAVVLATGGF EYDADLVRDF LRGPLTRAIG APSNTGDGLR MAMRVGAQLG NMREAWWAPV
VSLPGHRRDG ARNGLLTARE RALPGSIMVN GHGRRFANEA ANYNAFGGAY HQLDASKFEY
PNLPSYLIFD QSTVDRFGVF GGAPGGVVPD WLERADTLDA LAGRLGLPAA EVAATVRRFN
EHARAGTDPD FGRGDNAYDR FPGGRVLDPE SVLSTLGPVE TAPFYGVEVG SSALGTKGGP
RTDREGRVLD VDGDVIRGLY AAGNVMASPS GMVYGGAGAT LAVAGVWGLY AGRAAARDPA
SGARSPVLSE RSGS
|
|---|
| |