Gene Franean1_4736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4736 
Symbol 
ID5673078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5655384 
End bp5656190 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content72% 
IMG OID641243593 
ProductABC transporter related 
Protein accessionYP_001509009 
Protein GI158316501 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGTGG TTGCGACCAG CACCGACAGC AGCGTCGCCG GGGTGACCAC GGAACCGGCA 
CTGGAGGTCC GTCACGTCAC CAAGCGCTAC GGCGGTCTTA CCGCCATCAG TGATGTGTCC
CTGCGGGTGG ACCCCGGCGA GGTCTGTGGC TTCATCGGCC CGAACGGCGC CGGCAAGACC
ACCCTGTTCG ACATCATCTC GGGCCTGACG CCGCCCACGT CGGGCGCAGT GTTCCTCGAC
GGAGTGGACG TCACCCGGCA GCTCCCAGAA CGCCGGGCGC GTTCCGGCGT GCGTCGTACC
TTCCAACGCG CGCAGCTGTA CAGCCGCCTC TCGGTGGAGG ACAACGTCCT GACCGCCATG
GAATGGCGCG GCGGTGGGGG CGGGCTGCTC GCCGACCTGT TCGCCGCGCC CGGGCGGCGG
CGGCGCGAGG CCGAGCGGCG GGAGTACGCG CTGTCGGTGC TCGCCGCCTG CGGGCTGGCC
GACCTGCGGC ACAAGCCCGC CGGTGCGCTG CCGATCGGCC AGGCCCGGCT GGTGGAGCTG
GCGCGGGCGA TCGCCGACCG ACCCCGGCTG CTGCTGCTCG ACGAGCCGAC GTCGGGGCTG
TCCGCGCACG AGACGGAGCT CTTCGGCGAG CAGATCCAGC GTCTGCGGAC GACCGGCGTG
GCGGTCGTCC TCGTCGAGCA CGACGTCGGC TTCGTCATGG GCCAGTCGGA CCGGGTCGTG
GTGCTGAACC TCGGCTCCGT CCTGGCCGAG GGCACACCGG ACGAGATTCA GGCCCACCCC
GCCGTCCGAG CGGCCTACCT GGGCTGA
 
Protein sequence
MGVVATSTDS SVAGVTTEPA LEVRHVTKRY GGLTAISDVS LRVDPGEVCG FIGPNGAGKT 
TLFDIISGLT PPTSGAVFLD GVDVTRQLPE RRARSGVRRT FQRAQLYSRL SVEDNVLTAM
EWRGGGGGLL ADLFAAPGRR RREAERREYA LSVLAACGLA DLRHKPAGAL PIGQARLVEL
ARAIADRPRL LLLDEPTSGL SAHETELFGE QIQRLRTTGV AVVLVEHDVG FVMGQSDRVV
VLNLGSVLAE GTPDEIQAHP AVRAAYLG