| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4707 |
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| Symbol | |
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| ID | 5673049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5622819 |
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| End bp | 5623523 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641243564 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508980 |
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| Protein GI | 158316472 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.283479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.582134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTTTT CCATCTGCGA GCACCTTGCT CGGCGCGGGG ACCGCGTGGC GGTGCTCGAC
GTGAACGGGG ACGCGGCGCA GCAGGCGGTC AAGAAGCTGC GGGGACGTGG CGCGCAGGCC
ATGGCGTGTG CCGTGGATGT CTCCGATCGA GCGGCGGTCG AAGATGCGCT GGCCCAGGTG
CGCGGCGAAC TCGGACCCAT CGAGATCATG GTGACCTCCG CGGCGATCGC ACCGTTTGAT
CCCTTCACCG AGATTTCCCT TGACTCGTGG GAGCGTGTCC TTGCCGTTAA TCTCACCGGC
ACGTTCCACT GCCTGCAGGC GGCCATCCCC GACATGGTCG CGGCCGGCTG GGGCCGCATC
GTCACGATCA CGTCGTCGGC TGCCCAGATC ATGACCTCTA ACCACGCGCA CTACGTCGCG
TCGAAGGGCG GCGTGGTCGC GTTGACGAGA GCGGTGTCCT TCGAATATGC GCGGCAGGGG
ATCACGGTGA ACACCATTGC GCCCCACATC ATCGACACCC CGATGCTCCG CCAGGCCCGC
GCGGAGCTCG GGGATCCGAC GGGCGACGGA GGTGCCAGCC ACATCCCCGT CGGCCGGCTG
GGCACAGGCG ACGACATCGC CGCTGCCTGT CTGTACCTGT GCTCTGAGGA GGCCAGCTAC
ATCACGGGGC AGCTGTTCGG TGTCAATGGC GGTGCCGTCG CGTGA
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| Protein sequence | MGFSICEHLA RRGDRVAVLD VNGDAAQQAV KKLRGRGAQA MACAVDVSDR AAVEDALAQV
RGELGPIEIM VTSAAIAPFD PFTEISLDSW ERVLAVNLTG TFHCLQAAIP DMVAAGWGRI
VTITSSAAQI MTSNHAHYVA SKGGVVALTR AVSFEYARQG ITVNTIAPHI IDTPMLRQAR
AELGDPTGDG GASHIPVGRL GTGDDIAAAC LYLCSEEASY ITGQLFGVNG GAVA
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