Gene Franean1_4683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4683 
Symbol 
ID5673025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5593783 
End bp5594970 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content73% 
IMG OID641243540 
Productgalactose-1-phosphate uridylyltransferase 
Protein accessionYP_001508956 
Protein GI158316448 
COG category[C] Energy production and conversion 
COG ID[COG1085] Galactose-1-phosphate uridylyltransferase 
TIGRFAM ID[TIGR00209] galactose-1-phosphate uridylyltransferase, family 1 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCGC TAACATTCGA CCTCGATGAG TGGACCTCGA TGAGTGGAAC AGCCCGGGGG 
AGTGGCGTCC CGTCCACTCC ACACCGCCGT TTCGATCCGC TGCGGGGGCG GTGGGTTCTG
GTGTCGGCTG GTCGGGACCG GCGGCCGTGG TCGGGTGAGA GCCAGGCGGT CAGCCCGGTC
GCGGTGGCGC GGCACGACCC GGAGTGCGGG CTGTGTCCCG GCAACCTCAG GGCGGCCGCC
GGCCTCGACC GGATCCGAAA TCCCGACTAT GCCGGGCCGT ACGTGTTCGC CAACGACTTC
CCGGCGCTGC GACCCCCCTT GTCTGACGAG CGCCTGGAGG TGCGGGCCGA GTCAGGAATC
CCGCCCGGCC GGGCCGGAGG CGCCGAGGAG TTGCTGCGCG CGGAGCCCGA GACCGGTGTC
TGCCGGGTGC TGTGCTTCGG GCCGTGGCAC GACCGGCACC TCGCGGCGAT GGGCGACGGG
GAGCTGGCGG CCGTTGTCGA TCTCTGGATC GGCCAGGCCG CCGAGCTGGG CCGGGTGTGG
CGGTGGGTGC AGATCTTCGA GAACCGGGGG GCCGCGATGG GTGCCTCCAG CCCGCATCCG
CACGGCCAGG TGTGGGCGAG CGCCTCGCTG CCGGACGAGC CGGCTGCGGA GGACGTCCGC
CAGCGTGACT ACCTGAGTAG GCACGGCCGC CGGTTGCTGG TCGACTATGC CGGAATCGAG
CGCACCGCCG GGGAGCGGGT GGTGGCGGAC AACGGCGAGT GGCTCGCGGT CGTGCCCTAC
TGGGCGGTGT GGCCGTTCGA GACGATGCTG ATGCCCGTGC GCCCGGTTGC CAGCCTCCCC
GAGCTGGACG GACCCCTTCG GGAGAGCCTG GTCGGGATGC TGCGGACCCT GTTGACGGCC
TATGACGCCC TGTTCGGCGT CCCGTTTCCC TACTCGATGG GCTGGCACGG CGCACCGGGA
CCGGACGGCG CCGGACCGGA CGGTGCCGCC GTGGCCGCGC CGGGCAGAGC CGGGCACTGG
CAGCTGCACG CCCACTTCTA CCCGCCGTTG CTGCGTTCGC CGACCGTCCG CAAGTTCCTC
GTCGGCTACG AGATGCTGGC CGGCGCGCAG CGCGACATCA CCCCGGAGCA AGCCGCGGCG
ATGCTGCGGG CCCACGTCCC GGCCGCCGGA CCGGACCGGG TCCGATGA
 
Protein sequence
MLALTFDLDE WTSMSGTARG SGVPSTPHRR FDPLRGRWVL VSAGRDRRPW SGESQAVSPV 
AVARHDPECG LCPGNLRAAA GLDRIRNPDY AGPYVFANDF PALRPPLSDE RLEVRAESGI
PPGRAGGAEE LLRAEPETGV CRVLCFGPWH DRHLAAMGDG ELAAVVDLWI GQAAELGRVW
RWVQIFENRG AAMGASSPHP HGQVWASASL PDEPAAEDVR QRDYLSRHGR RLLVDYAGIE
RTAGERVVAD NGEWLAVVPY WAVWPFETML MPVRPVASLP ELDGPLRESL VGMLRTLLTA
YDALFGVPFP YSMGWHGAPG PDGAGPDGAA VAAPGRAGHW QLHAHFYPPL LRSPTVRKFL
VGYEMLAGAQ RDITPEQAAA MLRAHVPAAG PDRVR