| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4681 |
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| Symbol | |
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| ID | 5673023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5590958 |
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| End bp | 5592436 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243538 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001508954 |
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| Protein GI | 158316446 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.026787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA ACCCGATCCT GCCCGGTTTT CACCCGGACC CGTCGATCTG CCGGGTGGGC
GACGATTACT ACCTGGTGAC CTCGAGCTTC GAGTACTTCC CCGGGGTGCC GATCTTCCGC
AGCACGGACC TCACCGGCTG GGAACAGATC GGCAACGTGC TCGACCGCCC CACCCAGCTG
AACGTGACCC CGGGCCTGGA GTCGGCCAGC ACAGGGATCT TCGCGCCGAC CCTGCGCCAC
CATGACGGCA GATTCTGGCT CGCCACGACG AACTTCACCG ACGTCCGTAA GGGTCACCTC
ATCGTCCAGG CGGCCGACCC GGCCGGCGCA TGGACCGACC CGGTCCACAC AGGCGGGGGA
ACGGTCGGGA TTGACCCCGA CCTGGCGTGG GACGAGAACG GTACCTGTCA TCTGACGTGG
TGCTTTCCCG GGCAGATCAT GCAGGCCGCC GTCGACCCGG AGAGCGGGAG GCTGCTCTCC
GAGCCCCGTG GGCTGTGGAG CGGGACGGGG CGTGCCCACC CTGAAGGCCC GCACCTGTTC
AGCCGGGAAG GCTGGTGGTA CCTGGTCATC GCCGAGGGCG GCACCGACGG TGGCCACGCC
GTGTCGATCG CGCGTTCCCG CTCGATCACC GGACCCTTCA CCGGCAACCC CGCCAATCCG
ATCCTCACCA GGAGCGGCAC CGAACACCCG GTCCAGAGCA CCGGCCACGC CGACTTCGTC
GAACTTCCCG GGGGTGAGTG GGCGATGGTT CACCTGGGGG TCCGCCCGCG CGGCACGTTC
CCCAAGTTCC ACGTCAACGG CCGGGAGACC TTCCTGACCG GCATTACCTG GGCCGACGGC
TGGCCGATCG TGGTGGAGGA CCGGTTCACG GTGCCAGTCC GGGACAACTC CTTCGTCGAC
GAGTTCCGCA CGCCGACACT GCATCCCCGG TGGGTCTCCC CGGGGACCGA CCCACGGACT
TTCACCCGCC ACCGACCCGG CGGAGTCGTC CTGGCCGCCG GCCGGGCACC CGACGCGGGC
GAGGCCAGGC GCCTGCTCGC TGTGCGCGCC CAGGACCCGC AATGGCAGGT AACCGCGGTC
ATCCCCGACG GCGACGCCTG CCTGACCGTC CGGATGGACG ACGCCCACTG GGTCGCCGTC
GAACGCCGTG GGGAGATGCT GGCGGCCAGG ATGGTGCTCG GCCCACTTGA CCAGACCCTC
GCCACCGCCG CCGGGATCGG CCCGGGCGAC GCGCTCGCCG TCCGCGCCGT GACGCATGCC
GAGGCCGCCA GCTTCCGTGC CGGCCCCGAC CAGCTCGAGC TGGGCCACCT CACCGACGGC
GAGTTCCGGC TGCTCGCCAC GGTCGACGGG CGCTACCTCT CGACCGAGGT CGCCGGCGGC
TTCACCGGGC GCGTCGTCGG AGTCGAGGCG ATCGGCACCG ACGCCACCCT GTCACGATTC
GAATACCTGG CCTTGGATGC CGCCGCGCCC CAGGGCTAG
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| Protein sequence | MNANPILPGF HPDPSICRVG DDYYLVTSSF EYFPGVPIFR STDLTGWEQI GNVLDRPTQL
NVTPGLESAS TGIFAPTLRH HDGRFWLATT NFTDVRKGHL IVQAADPAGA WTDPVHTGGG
TVGIDPDLAW DENGTCHLTW CFPGQIMQAA VDPESGRLLS EPRGLWSGTG RAHPEGPHLF
SREGWWYLVI AEGGTDGGHA VSIARSRSIT GPFTGNPANP ILTRSGTEHP VQSTGHADFV
ELPGGEWAMV HLGVRPRGTF PKFHVNGRET FLTGITWADG WPIVVEDRFT VPVRDNSFVD
EFRTPTLHPR WVSPGTDPRT FTRHRPGGVV LAAGRAPDAG EARRLLAVRA QDPQWQVTAV
IPDGDACLTV RMDDAHWVAV ERRGEMLAAR MVLGPLDQTL ATAAGIGPGD ALAVRAVTHA
EAASFRAGPD QLELGHLTDG EFRLLATVDG RYLSTEVAGG FTGRVVGVEA IGTDATLSRF
EYLALDAAAP QG
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