| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4669 |
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| Symbol | |
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| ID | 5673011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5574344 |
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| End bp | 5576833 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243526 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_001508942 |
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| Protein GI | 158316434 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.170324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCTC GCTGGAACGC CGCGTTCATC GCCGCCCCGT CCGATCCGGC CGGGCGCGGT
CCCGCCCCGG CGCCGTACCT GCGCCGCGAG TTCACCGTGG GCAATGGCCT GCGCTCCGCC
ACCCTGCACG TCACCGCGGT GGGCCTGATC GAGGCTCACC TGAACGGGGC CCCGGTGGGC
GACGAGGTCC TCGCCCCGGG CTGGACGTCC TACCGGCATC GCCTGGTCGT GAGCAGTCAC
GACGTCACCG GCCTGCTGGT GGAGGGCGCC AACGCCCTCG GCGCCGTCCT CGGTGAGGGC
TGGGCGGTGG GCAGGCTCAC CTGGGAGAAG GACAAGCGGG CCGTCTGGGC GGACCACCCG
GCCGGCTTCC TGCAGCTCGA CCTCGACTAC GGCGACCGGG TGGACGTGAT CAGAAGCGGT
GCCGACTGGC GGGCGGGCAC CGGGGCGACC CTGACGGACA GCATCTACGA CGGCGAGACC
CATGACGCGC GCCTGGAGCC GGCGGGCTGG GCAGAGCCCG GCTTCGACGA CGAGCACTGG
TCGCCAGTGG AGGTCGTCGC ACGCGATCTG ACCACGCTGA TCGCGCCGAG CGCGCCGCCG
ATCCGACGGG TGCAGGAGCT GCCCGCCGTC GACATCCTGA CGACGCCGGC GGGCCGGACG
GTCGTCGACT TCGGGCAGAA CCTGTCGGGC TGGGTCCGCC TGACCGTCCG CGGGGAGGCC
GGCACCACGA TCGTCCTGCG GCACACCGAG ACGTTGATCG ACGGCGAGGC GGACTTCCGG
CCCAACCGGA CGGCGCTGGC GACCGACTGC TACGTCCTGC GGGGCGGTGA TCCGGAGACG
TGGGAGCCTC GGTTCACCTT TCACGGTTTC CGTTACGTCG AGATGGAGGG GTGGCCCGGC
AGCCTCGACG CCGACGCGAT GACCGCGGTG GTGGTGCACA GCGACATGCG CCGGACCGGG
TGGTTCGAGA CGTCCGACGA ACTGCTCAAC CAGCTGCATC GCAACGTCGT CTGGTCGATG
CGCGGCAACT TCGTCGGCGT GCCCACCGAC TGCCCGCAGC GCGACGAGCG GCTCGGCTGG
ACCGGCGACA TCAACGCCTT CGGCCCCACC GCCGCCTTCC TCTACGACGT GCGCGGCGTG
CTGGGCTCGT GGCTCACCGA CCTCGCCGTC GAGCAGCGCG CGCAGGGGCA CGTGCCGCTG
GTCGTCCCGG ACGTGGGGGG CATGCCGATC ACGGCGCCCA CCGCGCTGTG GGGAGACGTC
GCGGTCAGCC TGCCCTGGAC GCTCTACCAG GAGTACGGCG ACCGGGAGCT GCTCGCCGAC
CAGTACGAGT CCATGACGGC CTTCATCGAC AGCGTGGAGG GCCTGCTGGA CGAGCGGGGG
CTGTGGAACT CCGGTTTCCA GTTCGGTGAC TGGCTCGATC CGGACGCGCC GCCGAAGAAC
CCGGCCGGCG GCAGGACGGA CGCCTACCTG GTCGCCAGCG CCTTCTTCTG CCACACGACC
CGCCAGCTGG CGCAGGCCGC CGAGGTCCTG GGCCACACCG GCGACGCCGC CCGGTACACG
GCCCTGCACC AGCGTGTCCG CGCCGCCTTC CGCGACGAGT GGGTCACCCC GTCCGGCCTG
GTCGCGAACG ACACGGCGAC CGCCTACGCC CTGGCCATCT GCTTCGACAT CCTCGACCCG
GCCCAGCAGG CGCGCGCCGG GCGCCGGCTC GCCGACCTGG TCAGCAAGGC CGACCACAGG
ATCAGCACGG GCTTCGCCGG CACGCCGCTG GTCGCACACG CGCTGAGCCG CACCGACCAG
CTCGACACCG CCTACCGGTT GTTGCTGCAG ACCGAGTGCC CGTCGTTCCT CTACCCGGTG
ACGCGGGGCG CGACGACGAT CTGGGAGCGG TGGGACGCGA TCCGGCCCGA CGGATCACTG
CACGACACCG GCATGACCTC GCTCAACCAC TACGCCCTGG GCGCCATCGC GGACTGGCTG
CACCGCGTCG TCGGCGGCCT CGAACCCGTC GAGCCCGGCT ACCGGCGGAT GCGGATCGCG
CCGCGGCCCG GCGGCGGCCT CACCCACGCC ACGCTCACCC ACGACACCCC GCACGGGAGG
GTCCGTGTCG CCTGGCGCCG GCAGCCCGAC AGCCGGATCA CCGTCGAGGT CGACGTCCCG
CCGGGCACGG CCGCCGACGT CGTCCTGCCG GGCCACCCCG ACAGGCTGAG CGTCCCCGTC
GGGCCGGGCA GCCACCGCTG GGAGTACGAC GTCCCGACGC CGGACCGGCC CGATTACAGC
CTCGACACCC CACTCAGGCA GGTCTTTCGA GATTCGGCGC TGTGGGCCGA GCTCCAGTCC
GTCCTTCGCC GGCACCTGCC CCAGTTCGCG GACGCCGACA GCGGGACGGA ACCATCCCTG
CCGAGCCTGC GCGCCCTGCT GGGGTACTTC CCGGCGCAGG CCCCGGCTCT GGAGGCCGAC
CTGGTCGCCG TGCTTGGGAC GCGAACCTAG
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| Protein sequence | MPPRWNAAFI AAPSDPAGRG PAPAPYLRRE FTVGNGLRSA TLHVTAVGLI EAHLNGAPVG
DEVLAPGWTS YRHRLVVSSH DVTGLLVEGA NALGAVLGEG WAVGRLTWEK DKRAVWADHP
AGFLQLDLDY GDRVDVIRSG ADWRAGTGAT LTDSIYDGET HDARLEPAGW AEPGFDDEHW
SPVEVVARDL TTLIAPSAPP IRRVQELPAV DILTTPAGRT VVDFGQNLSG WVRLTVRGEA
GTTIVLRHTE TLIDGEADFR PNRTALATDC YVLRGGDPET WEPRFTFHGF RYVEMEGWPG
SLDADAMTAV VVHSDMRRTG WFETSDELLN QLHRNVVWSM RGNFVGVPTD CPQRDERLGW
TGDINAFGPT AAFLYDVRGV LGSWLTDLAV EQRAQGHVPL VVPDVGGMPI TAPTALWGDV
AVSLPWTLYQ EYGDRELLAD QYESMTAFID SVEGLLDERG LWNSGFQFGD WLDPDAPPKN
PAGGRTDAYL VASAFFCHTT RQLAQAAEVL GHTGDAARYT ALHQRVRAAF RDEWVTPSGL
VANDTATAYA LAICFDILDP AQQARAGRRL ADLVSKADHR ISTGFAGTPL VAHALSRTDQ
LDTAYRLLLQ TECPSFLYPV TRGATTIWER WDAIRPDGSL HDTGMTSLNH YALGAIADWL
HRVVGGLEPV EPGYRRMRIA PRPGGGLTHA TLTHDTPHGR VRVAWRRQPD SRITVEVDVP
PGTAADVVLP GHPDRLSVPV GPGSHRWEYD VPTPDRPDYS LDTPLRQVFR DSALWAELQS
VLRRHLPQFA DADSGTEPSL PSLRALLGYF PAQAPALEAD LVAVLGTRT
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