| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4666 |
|---|
| Symbol | |
|---|
| ID | 5673008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5569454 |
|---|
| End bp | 5570971 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641243523 |
|---|
| Product | xylulokinase |
|---|
| Protein accession | YP_001508939 |
|---|
| Protein GI | 158316431 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.114264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.676846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCG TCGCGGGGAT CGACTCGTCC ACCCAGTCGT GCAAGGTGGT CATCCGGGAC
GCCGACTCCG GCGCTCTCGT CCGCCAGGGG ACGGCGCCCC ATCCCCCCGG GACGGAGATC
GATCCCGAGC ACTGGTGGAC GGCCCTGCTC ACCGCGGTCG AACGGGCCGG CGGCCTCGGC
GATGTCGCAG CCGTCTCGGT CGCCGCCCAG CAGCACGGGA TGATCGCGCT GGACCGCGAC
GGGCGGGTCA TCCGGCCCGC GCTGCTGTGG AACGACACCC GGTCCGCCCA GGCGGCGGAC
GACCTCGTCG CCGAGCTCGG CGACGGCGAG GCCGTGCAGG GAGCCAAGCA GGGCGCTGAA
CTGGGCGCTG AGCACGGCGG CGGGCGGCGA GCCGAGCGGT GGGCGGCCGC GGTCGGCCTG
GTCCCGGTCG CCTCGTTCAC CGTCACCAAG CTGCGCTGGC TCGCCGACCA CGAGCCCGAC
GCCGCGGCCC GGATCGCCGC GGTCGCGCTG CCCCACGACT GGCTCACCTG GCGCCTGTCC
GGCGCCCGGT CGTTGCACAC CCTGCGGACC GACCGCTCCG ACGCCTCCGG CACCGGCTAC
TTCGACGCCG CCAGCGGCAC CTACCGGCGG GACCTGCTGG CCCTGGCGCT GCGCCGCGAG
CCCGGCGACG CCGAACGGAT CGTGCTCCCG ACCGTCGCCG GCCCCGAGGA GATCGCGGGA
CGGGGCGACA CCTCCGCCGG CTGGGGCCAC CTGCTGCTGG GGCCGGGATG CGGCGACAAC
GCCGGGGCGG CGCTCGGGTT GGGCCTGCGG CCGGGCGAGG CTCTGATGTC CCTGGGGACC
TCCGGTGTCG TCGCCGCGGT CGCCACCGCC GCCACCCGGG ACGCCACCGG CGCGGTCGCC
GGCTTCGCCG ACGCGACCGG CCACCACCTG CCGCTCGCCT GCACCCTGAA CGCCAGCCGT
GTCCTCGACG CGACGGGAAC CCTGCTCGGC GTCGGCCACG ACGAGCTCAG CCGGCTCGCC
CTCAGTGCCC GGCCGGGCGC CGCGGGCCTG GTGTTCGTGC CCTACCTCGA GGGCGAGCGC
ACCCCGAACC TGCCCACCGC CACCGGTTCC CTGCACGGCC TCACGCCGGC GTCGATGACG
CCGGCCAACC TCGCCCGCGC CGCCGTGGAG GGCGTGCTCT GCCTTCTGGC GGGCTGCCTC
GACGCCCTGC GCGCCCAGGG CGTGCGCATC GACCGGGTGT CCCTCGTCGG CGGCGGCGCC
CGGTCCCGCG CCGTCCAGGA GATCGCGCCC GCGATCCTCG GGGTGCCCGT CGCCGTGCCC
GCGCCCGGCG AGTACGTCGC CGACGGCGCC GGACGGCAGG CCTCGGCGGT CCTGGCCCGC
TCGGACGGCG CCGCACCGCC GTCCTGGCAC CGCCCCGACG CCGTCACCCG CACGGCCGAA
CCGCTCCCCT CCGTCCTCGA CCGGTACCGG GAGGTGGCGG CTACCGTCGC CGCCACGATC
AAGAGCCAGC GTGGGTAG
|
|---|
| Protein sequence | MALVAGIDSS TQSCKVVIRD ADSGALVRQG TAPHPPGTEI DPEHWWTALL TAVERAGGLG
DVAAVSVAAQ QHGMIALDRD GRVIRPALLW NDTRSAQAAD DLVAELGDGE AVQGAKQGAE
LGAEHGGGRR AERWAAAVGL VPVASFTVTK LRWLADHEPD AAARIAAVAL PHDWLTWRLS
GARSLHTLRT DRSDASGTGY FDAASGTYRR DLLALALRRE PGDAERIVLP TVAGPEEIAG
RGDTSAGWGH LLLGPGCGDN AGAALGLGLR PGEALMSLGT SGVVAAVATA ATRDATGAVA
GFADATGHHL PLACTLNASR VLDATGTLLG VGHDELSRLA LSARPGAAGL VFVPYLEGER
TPNLPTATGS LHGLTPASMT PANLARAAVE GVLCLLAGCL DALRAQGVRI DRVSLVGGGA
RSRAVQEIAP AILGVPVAVP APGEYVADGA GRQASAVLAR SDGAAPPSWH RPDAVTRTAE
PLPSVLDRYR EVAATVAATI KSQRG
|
|---|
| |