| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4662 |
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| Symbol | |
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| ID | 5673005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5563689 |
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| End bp | 5566070 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243520 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001508936 |
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| Protein GI | 158316428 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.576806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGCA GCCCCCTGAG CCCCGGCAAG GTCCCGGACC TGGTGTCCCG GCTGACGCTG
GAGCAGAAGA TCGCCCAGCT GACGGGGTTC GCGGTCACCG ATCTCATCGT CCGCGGCGAG
GGACCGGGCC CGGCCAGTCC GGACATCGAC GTGAGCCGGG TGCCGTCACT GCGGCCGCAC
GGGGCGGGCC ACCTGTCCCT GTCCTGGTTC CTCGGCCACG ACGCGGCGAG CCTGCGGTCC
GCGCTCGACA GGATCCAGTC GGCGGTGCGT GAGGTCGCCC CCTTCGGCAT CGGGGCCCTC
GCGCACAACG AGGCCGTCAA CGGCTTCCTG CACGTCTCGG GTTCGCAGTT CCCGACCGCC
TGGGCGCAGG CGGCGACCTG GGACCCCGCG CTGGTGACCC GCGCGGCGGC CGTGAGCGCC
GCCCACATGC GCCAGACCGG CATCCACCTC GCGTTCTCCC CGGTCATGGA CCTGGCGCGG
GACCCACGGT GGGGCCGGGT GCACGAGACG TACGGTGAGG ACCCCGAGCT CGCCGCCCAG
TTCTCGGTCG CGTTCGTCCG GGGCATCCAG GGTTCCGAGG ACGACTCCGG CCTGCTCGCG
ACCGGGAAGC ACTTCGCCGG GTACGGCGCC TCCGAAGGCG GCCTCAACCA GGCGGTCACC
CAGCTGGGAC GCCGCGCCCT GGTCGACGAG TACGCCGAGC CCTTCCGCCG GGCCATCGCC
GAGGCCGGCC TGGTCGCCGT CATGAACTCG TACAACGAGC TCGACGGCGT GCCCTGCGCC
GCCGACCGCT GGCTGCTCAC CGACCTGCTC CGCGGCCAGC TCGGCTTCGA CGGCATCGTG
GTCAGCGACT ACAGCGCCGT GGACATGCTG CGGACGATCT ACCACACCGC ATCCTCGGCA
GGGCAGGCCG CCGTCCAGGC GATCAGCGCC GGCCTGGACG TCGAGCTCCC CAGCGACGTG
AACTTCTCCC ACCTGGCCGA CGAGGTCACC GGTGGCCGTC TCGACGAACA CGTCCTCGAC
ACGGCGGTCG CCCGGGTCCT CACCGTCAAG GCCCGCGTCG GGCTCATCCC GGGGATGGCG
GCGCCACGCG CCGCGTCCGC CGCGGCGCCC CCGGACCGGG CCGAGGCGGC CGAGGTGCGC
CGCGCCGTCG CCGCCCGCGG CCTGGTCCTG CTCGCCAACG ACGGCACCCT GCCCCTGGCG
CCCCGGAGTG GACGCATCGT CGTCGTGGGC CCGGCCGCCG ACGAGCTGCG GATCCACTTC
GGCGCCTACA CCTCCGTCTC CAACGCCGAG ATGCCGCTGG GGATGATGGC GGTGATGACG
GGGCAGGTGC CCGGAGTCGA TCCGGCCACC TTCGTGTTCA CCGACATCTT CCAGCCCCGG
ATGCCCGGGT TCGACGAGCG GTTCGAGGCA GAGGCCCGGC GGATCCACCC CGACGCGCCC
ACCGTGCTCG ACGCGCTGCG GGGCTTCGAT CCGACCGTCG GGTTCGTTCC GCTCGGCCGG
TTCGAGGCCG GCCCCGGGCC CGCGCTGGAC CAGGCGACGG TGACGGCGGC CGTCACCGAC
GCCGACCTCG TCATCGCCGT CGTCGGCGAG CGGACCGGAT GGGTCGGGAA CAACACCGCC
GGCGAAGGCC AGTCCACCGC GTCCCCCGAC CTGCCCGGCG ACCAGGACGA GCTCGTCGCT
CTGCTCGCCG CGACCGGCAG GCCCCTGGTG ACCGTGATGG TCTCCGGACG TCCCCTCCTC
CTCGACAGCG TGGCTCGGGC CTCGCGCGCG GTCCTTCTCG CGCCACTGCT GGGAGAAGAA
GCCGGCCCGG CGATCGCCGG GGCCGTCTTC GGGACGATCA ACCCGAGCGG GAAGCTCCCA
AGCACCTTCC CCCGGCACCT GGGCCAGGTC CCGATCTATC ACGGGCACCA CTTCGGCAGC
GGCTACGACC ACCCCACCGG CACCCGGCAC GGCTACAACG ACCTCGACGA CGACGCCCCG
CTCTACGCCT TCGGGCACGG CCTGTCCTAC AGCACCTTCG ACATCGCCCT CGACGAGTCG
GCCGAACCGG CGGTCGAGGA GATCGACGGG CTGCTGCGGG CGCGGCTCAT CGTGTCGAAC
ACCGGCACCG TCGACGGCGA GACCGTCGTA CAGCTCTACG CACGGGACGA AGCCGCGACG
ATCGTCCGCC CCGTCCGCCA GCTCCTCGGA TTCACCCGCC TGGCCCTGGC CGCGGGAGAG
ACCCGGCGCG TTCTCCTCGA AGCCCCGACC GAACGGCTGT TCTACACCAT GGCCGACGGC
ACCCGTGGCC TCGAGGCCGG CGACGTCACC GTGCTGGCCG CGCTCAGCAG TGACGACGTC
CGCTGCTCGC GGACCGTCCC GCTGTCCGCC CGCCGCGCCT GA
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| Protein sequence | MNRSPLSPGK VPDLVSRLTL EQKIAQLTGF AVTDLIVRGE GPGPASPDID VSRVPSLRPH
GAGHLSLSWF LGHDAASLRS ALDRIQSAVR EVAPFGIGAL AHNEAVNGFL HVSGSQFPTA
WAQAATWDPA LVTRAAAVSA AHMRQTGIHL AFSPVMDLAR DPRWGRVHET YGEDPELAAQ
FSVAFVRGIQ GSEDDSGLLA TGKHFAGYGA SEGGLNQAVT QLGRRALVDE YAEPFRRAIA
EAGLVAVMNS YNELDGVPCA ADRWLLTDLL RGQLGFDGIV VSDYSAVDML RTIYHTASSA
GQAAVQAISA GLDVELPSDV NFSHLADEVT GGRLDEHVLD TAVARVLTVK ARVGLIPGMA
APRAASAAAP PDRAEAAEVR RAVAARGLVL LANDGTLPLA PRSGRIVVVG PAADELRIHF
GAYTSVSNAE MPLGMMAVMT GQVPGVDPAT FVFTDIFQPR MPGFDERFEA EARRIHPDAP
TVLDALRGFD PTVGFVPLGR FEAGPGPALD QATVTAAVTD ADLVIAVVGE RTGWVGNNTA
GEGQSTASPD LPGDQDELVA LLAATGRPLV TVMVSGRPLL LDSVARASRA VLLAPLLGEE
AGPAIAGAVF GTINPSGKLP STFPRHLGQV PIYHGHHFGS GYDHPTGTRH GYNDLDDDAP
LYAFGHGLSY STFDIALDES AEPAVEEIDG LLRARLIVSN TGTVDGETVV QLYARDEAAT
IVRPVRQLLG FTRLALAAGE TRRVLLEAPT ERLFYTMADG TRGLEAGDVT VLAALSSDDV
RCSRTVPLSA RRA
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