Gene Franean1_4647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4647 
Symbol 
ID5672990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5545402 
End bp5547366 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content67% 
IMG OID641243505 
ProductK potassium transporter 
Protein accessionYP_001508921 
Protein GI158316413 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAGC AGCAGCTGAC GACGCCGGAG CCCGGGCCGA CGCCGTCGGG GACCCATCAC 
GCGCAGGGGC GCGACGCGGC CCGGCTGGCG CTGGTCGTTG GCGCGCTCGG TGTGGTGTTC
GGGGACATCG GGACCAGCCC GATCTACACC CTTCAGACGG TGTTCAACCC GAGCGACCCA
CATCCCGTCC CGGTCAGCAC GGACAACGTG TTCGGCGTGG TGTCCCTGGT GTTCTGGTCC
GTCACGATCA TCGTCACGAT CACCTATGTT CTGCTGGCCA TGCGCGCCGA CAACGACGGC
GAGGGCGGCA TCATGGCGCT GATCACCCTG CTGCGCCGGT TGGGAACAGG ACAGGGTGGC
CGGACCGCCG CGGTACTGGC AGGGCTAGGC ATCTTCGGGG CGGCGCTTTT CTTCGGCGAC
AGCATGATCA CGCCGGCGAT CTCCGTGCTG TCCGCGGTCG AGGGCATCAA GATCGTGGAG
CCGTCGCTCG AGGAGCTGGT CGTGCCGGCC ACCGCGGTGA TCATCGTGCT GCTGTTTCTC
GTGCAGCGGT TCGGTACCGC CACGGTCGGC GGGGTGTTCG GACCCCTGAT GATCGTGTGG
TTCGTGACCA TCGGCGCGCT AGGTGTGGTC GGCATCGTCG GGCACCCTGC CATCCTTGAA
GCGTTGTCGC CGACCTACGC CGCAAGTTTC CTGGCCAACC ATTTCGGCAC CGCGTTCTTC
GCCCTGGCGG CGGTCGTGCT CGCCGTCACC GGAGCTGAGG CGCTGTACGC CGACATGGGA
CACTTCGGCC GACCGGCGAT CAGCCGGGCC TGGCTGCTCC TGGTGTTCCC GGCGTGCGTG
CTCAGCTACC TCGGCCAGGG GGCGCTGATC CTCGGCGACC CGGACACCAT CAGCGGCCCG
TTCTTCCTGC TCGCCCCCGG CTGGGCACGG CTGCCGCTCG TCCTGCTGGC TACCGCCGCG
ACTGTGATCG CCTCCCAGGC CGTGATCACC GGGGCGTACT CGGTCGCGTC GCAGGCCGCC
GAGCTCGGCT ACCTGCCTCG GCTGCGGGTC GCCCACACCT CGGAGTCCAT GATCGGGCAG
ATCTACGTCC CGTGGATCAA CTGGCTGCTG ATGGTCTCGG TGCTCACGCT CGTCTTCGCG
TTCCGTAGCT CGGCGGCCCT GGCGTTCGCG TTCGGCATGG CGGTGACGGG GACGATCACC
ATCACCACCC TGTTGTTCTT CTACATCGCC CGGCGGAGGT GGCACACGCC GCGGTGGCTG
CTCGGCCTGG GCGCGAGCGT GCTGCTGGTG GTCGACCTGC TGTTTCTCGC GGCCAACCTG
ACCAAACTCG TCCACGGCGC ATGGCTTCCG CTGCTCATCG CGCTGACGGC GTTCACCGTC
ATGACCACCT GGCAGCGGGG CCGAAAGATC GTCACCGCGC AGCGGGAACA GAGTGAGGGG
TCGTTGCACG ATTTTGTCGA GCAGCTACGC GTGAACGTGC CGTCCACGGA CCGGGTGCCG
GGCACGGCCG TGTTCCTCAA CCGCGGCAAG CGGACCGCGC CGCTGGCACT GCGGGCGAAC
GTCGAGCACA ACCACGTGCG CCACGACCTG GTCCTGATCG TGTCGGTGGA GACCCTGCCG
GTGCCGCGCG TGCCGGCGAA CGATCGGATC GCCGTGGACG ATCTGGGCTA TACCGACGAC
GGCATCAGCC ACATCACCGC ACGGTTCGGC TACATGGAGA CGCCAAATGT GCTCGGCGCC
CTCAGAACGA TCGACCCGGC CATCGTCGAA GGACGGCAGC TGAACCTGGA CCAGGCGTCC
TACTTCCTGT CTAAAATCGA GCTTCGAAGC GGGAAGGCGC CGATCATGGC ACGCTGGCGC
AAACGCCTTT TCATCGCGAC CTCATACATC ACCGCTGACG CCGCCGAACA CTTCGGCCTC
CCACGCGACC GTACTGTCAT TATGGGCTCA CATATCGAGG TGTAG
 
Protein sequence
MTEQQLTTPE PGPTPSGTHH AQGRDAARLA LVVGALGVVF GDIGTSPIYT LQTVFNPSDP 
HPVPVSTDNV FGVVSLVFWS VTIIVTITYV LLAMRADNDG EGGIMALITL LRRLGTGQGG
RTAAVLAGLG IFGAALFFGD SMITPAISVL SAVEGIKIVE PSLEELVVPA TAVIIVLLFL
VQRFGTATVG GVFGPLMIVW FVTIGALGVV GIVGHPAILE ALSPTYAASF LANHFGTAFF
ALAAVVLAVT GAEALYADMG HFGRPAISRA WLLLVFPACV LSYLGQGALI LGDPDTISGP
FFLLAPGWAR LPLVLLATAA TVIASQAVIT GAYSVASQAA ELGYLPRLRV AHTSESMIGQ
IYVPWINWLL MVSVLTLVFA FRSSAALAFA FGMAVTGTIT ITTLLFFYIA RRRWHTPRWL
LGLGASVLLV VDLLFLAANL TKLVHGAWLP LLIALTAFTV MTTWQRGRKI VTAQREQSEG
SLHDFVEQLR VNVPSTDRVP GTAVFLNRGK RTAPLALRAN VEHNHVRHDL VLIVSVETLP
VPRVPANDRI AVDDLGYTDD GISHITARFG YMETPNVLGA LRTIDPAIVE GRQLNLDQAS
YFLSKIELRS GKAPIMARWR KRLFIATSYI TADAAEHFGL PRDRTVIMGS HIEV