Gene Franean1_4631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4631 
Symbol 
ID5672974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5524292 
End bp5524984 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content73% 
IMG OID641243489 
ProductTetR family transcriptional regulator 
Protein accessionYP_001508905 
Protein GI158316397 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC CGACCCCCGC GACGACACCA CGGGTTGGGC GGCCCCGCCG TTTCGACGCC 
GACACGGAAC GGGGCATGAT CATGGACGCG GCGATGCGGC TCATGGCGCT CAACGGCTAC
GCCCAGACGT CCGTCGGCGA GATCCTCGCC GACGCCGGGC TGTCGACCCG GTCGTTCTAC
CGCCACTTCG AGTCGAAGGA AGCCTTGCTG CTGGCCCTCC TCGAACGCGA CGCCGCGGCG
GTGGCGCGTT CGCTGGAGCG CGCCGTGGCC GCGGCCTCCG ATCCGGTCGC CGCGATCGAG
GCCTGGCTGG AGCGATTCCT CGACGTCTTC TACGAGCCCC GGCGGGCCGC CCGCGTGGCG
CTGTTCTCGT CCCCCGCTGT TCGCGGCTCC TACCCGCTGG CCGACGTGCT ACAGGACATG
CGACGGGTCT TCTGTCGGCC GCTCGTCGGC GCATTGCGCG CGGGCCACGA GGCAGGTCTT
CTGCGCTCAC CGACCCCGGA GGCCGACGCG AACAGCCTGT ACGCCCTCGT CAGCGCCGCC
GCGGATCGGC ACGAGGCCCA CTTCCAGCAG CGGGCGGCGG CGAGGGCGCA CGTCGTGCGG
TTCGCGTGGC CGGCCCTCGG GCTGCCGGAG GGCGAGACCC CCGGCGGGCC GAGGAGCCGG
CGAGCCGACG AGCGAGGTCG AGCACGAAGA TGA
 
Protein sequence
MTEPTPATTP RVGRPRRFDA DTERGMIMDA AMRLMALNGY AQTSVGEILA DAGLSTRSFY 
RHFESKEALL LALLERDAAA VARSLERAVA AASDPVAAIE AWLERFLDVF YEPRRAARVA
LFSSPAVRGS YPLADVLQDM RRVFCRPLVG ALRAGHEAGL LRSPTPEADA NSLYALVSAA
ADRHEAHFQQ RAAARAHVVR FAWPALGLPE GETPGGPRSR RADERGRARR