Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4631 |
Symbol | |
ID | 5672974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5524292 |
End bp | 5524984 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641243489 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001508905 |
Protein GI | 158316397 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGC CGACCCCCGC GACGACACCA CGGGTTGGGC GGCCCCGCCG TTTCGACGCC GACACGGAAC GGGGCATGAT CATGGACGCG GCGATGCGGC TCATGGCGCT CAACGGCTAC GCCCAGACGT CCGTCGGCGA GATCCTCGCC GACGCCGGGC TGTCGACCCG GTCGTTCTAC CGCCACTTCG AGTCGAAGGA AGCCTTGCTG CTGGCCCTCC TCGAACGCGA CGCCGCGGCG GTGGCGCGTT CGCTGGAGCG CGCCGTGGCC GCGGCCTCCG ATCCGGTCGC CGCGATCGAG GCCTGGCTGG AGCGATTCCT CGACGTCTTC TACGAGCCCC GGCGGGCCGC CCGCGTGGCG CTGTTCTCGT CCCCCGCTGT TCGCGGCTCC TACCCGCTGG CCGACGTGCT ACAGGACATG CGACGGGTCT TCTGTCGGCC GCTCGTCGGC GCATTGCGCG CGGGCCACGA GGCAGGTCTT CTGCGCTCAC CGACCCCGGA GGCCGACGCG AACAGCCTGT ACGCCCTCGT CAGCGCCGCC GCGGATCGGC ACGAGGCCCA CTTCCAGCAG CGGGCGGCGG CGAGGGCGCA CGTCGTGCGG TTCGCGTGGC CGGCCCTCGG GCTGCCGGAG GGCGAGACCC CCGGCGGGCC GAGGAGCCGG CGAGCCGACG AGCGAGGTCG AGCACGAAGA TGA
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Protein sequence | MTEPTPATTP RVGRPRRFDA DTERGMIMDA AMRLMALNGY AQTSVGEILA DAGLSTRSFY RHFESKEALL LALLERDAAA VARSLERAVA AASDPVAAIE AWLERFLDVF YEPRRAARVA LFSSPAVRGS YPLADVLQDM RRVFCRPLVG ALRAGHEAGL LRSPTPEADA NSLYALVSAA ADRHEAHFQQ RAAARAHVVR FAWPALGLPE GETPGGPRSR RADERGRARR
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