Gene Franean1_4629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4629 
Symbol 
ID5675741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5521926 
End bp5523125 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content69% 
IMG OID641243487 
Productamidohydrolase 2 
Protein accessionYP_001508903 
Protein GI158316395 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCCCG TCGTCGACGA GGAGGAGGTA GGAACCGTGG CAAAGATCTG GGCCAATTCG 
GGTGACTCGC ACCTTGTCGA GCCGGACGAT CTTTTCGACA GGAGCTTGCC CGGGTCCCTC
GCGGCACGGA TGCCGCGCAG CGTCAAGGAC CTCGATGGCG GCTGGGAGAC GATCCACGTC
GACGGACAGG AGTTCCGCCG CCGCCTGCCC CGGCCCGGCA GGAAACTCAC CGACGAGAAC
GGCCACACCG TTCCCGAGCG GGCGCCCGGC GCCAACGACA GGAAGATGCG CCTGCTCGAC
CTGGACTCCG AAGGCATCTG GGCCGAGCTC ATCTACCCCT CGCTGGGGAT GTGGACCTCA
TCGATCCGTG ACCCGGAGCT GCTCGCGGCC GGCGCCCGAG CGATCAACGA CTGGGCCATT
GAGTACCAGC GGTTCTCACC CCGCTACGTC AGCGCGGCGA CGATCCCCTT CCTCACCGTC
TCCACCGCCG TCGCCGAGGT CACGCGGGCC GCGAGTCTCG GCTTCCATGC CGCGTCCCTG
CCGGTCGTGC CACTCATCGA CGGGGACGAC TGGCATCGCG AGTCGTGGGA GCCGCTGTGG
ACCGCCCTCG CGGAGACGGG TCTCGTGATC GCGTTCCACA TCGGCAGCGA GCCCCATGAG
GCGTCCAGCC GTAACGGCAC CTACTACCGT GGTCCCGGCG GGGCGCTCCT GAACTACCTG
GAGACGACCT ACGGCGGCCA GCGGGCGGTG GCCAAACTGA TCGCCGGCGG TGTGTTCGAC
CGGCACCCGT CCTTGCGTGC AATCGTGTCC GAGGGCGGAG CGACCTGGGG GCCGTTCGTC
GCCGACCGGC TCGACGAGGC GTACCGGCAG CACGCGTCGG CCGTCCACCC CCGTCTGCGT
CGGCTCCCCA GCGCGTACCT GTACGAGAAC GTCTACGCGT CCTTCCAACA CGACCGCTCG
GCCGTCGCCG CGGTGACGGC CATGGGCTGG CGCAATGTGT GCTGGGGCAG CGACTACCCG
CACATCGAAG GCACCTTCGG TCACACCCAG AAGACACTCC AGGAGCTCGT CGGCGACCTC
GACCCCGCCA CCCGGCACCG CATCACCCAG GGCGCCTTCC AGGAGCTGTT CCCCCACGTG
CCGCCCGCTC CAGACGGGGA GTCATCGCCT GACCCCCTGC TCGATGCAGC GGCGAGGTGA
 
Protein sequence
MRPVVDEEEV GTVAKIWANS GDSHLVEPDD LFDRSLPGSL AARMPRSVKD LDGGWETIHV 
DGQEFRRRLP RPGRKLTDEN GHTVPERAPG ANDRKMRLLD LDSEGIWAEL IYPSLGMWTS
SIRDPELLAA GARAINDWAI EYQRFSPRYV SAATIPFLTV STAVAEVTRA ASLGFHAASL
PVVPLIDGDD WHRESWEPLW TALAETGLVI AFHIGSEPHE ASSRNGTYYR GPGGALLNYL
ETTYGGQRAV AKLIAGGVFD RHPSLRAIVS EGGATWGPFV ADRLDEAYRQ HASAVHPRLR
RLPSAYLYEN VYASFQHDRS AVAAVTAMGW RNVCWGSDYP HIEGTFGHTQ KTLQELVGDL
DPATRHRITQ GAFQELFPHV PPAPDGESSP DPLLDAAAR