| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4607 |
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| Symbol | |
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| ID | 5672952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5489481 |
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| End bp | 5491262 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641243468 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_001508884 |
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| Protein GI | 158316376 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCG CCGCAACGGT GCTGGGTGTC CTGCGTGAAC GCGGCAAACG AGGGCTGCCG
TGCGACGAAC TGTACCGGCA ACTGTTCAAC CCACAGATGT ATCTGCTGGC CTACGGGCGT
ATCTACACCA ACCATGGTGC GATGACACCC GGAGTCACAC AGGAAACCGT GGACGGCATG
TCCCAGGAGA GGATCGGTCG CATCATCGAT GCGATGCGCC ACGAACGCTA CCGATTCCAC
CCCGTCCGGC GAGTCCACAT CCCGAAAAAG AATGGGAAGA CCCGCCCGTT GGGGCTACCG
ACCTGGTCGG ACAAGCTCGT CGGGGAAGTT GTACGCCTGC TCCTGGAGGC CTACTACGAA
CCGACGTTCT CCGACCGGTC CCACGGGTTC CGGCCACGGC GAGGCTGCCA CACCGCTCTG
CGGGAGATAG CCAACACCTG GACCGGAACA GCCTGGTTCA TCGAAGGAGA CATCACCGAC
TGTTTCGGGT CTCTCAATCA CGACCTGATG ATCGGAATCC TGTCGGAGAG GGTCCGCGAT
AACCGGTTCC TGAGGCTGGT GCGTAACATG CTACGAGCCG GATACCTGGA GGACTGGAGG
TGGGGGGCGA CTCTGTCGGG GGCTCCCCAA GGGGGCGTGG CCTCGCCGAT CCTGTCCTCG
ATCTACCTGC ACAAGCTGGA CGAGTTCGTC GAGAAGATTC TGATTCCGGA GTACACCCGA
GGGGGCCGCA GGGCGCGTAA CCCTGCTTAC CTCGTTCTGC AGAACGAGCT GGCCAAGGCA
CGCCGACGTG GTGACCGGGG CCAAGCCCGG ATACTACGAC GGCGAATGGT CAGCCTGCCC
AGCTCCGATC CCGATGATCC GGGATATCGG CGGCTGCGTT ACTGCAGATA TGCGGATGAC
CATCTACTCG GGTTCACCGG ACCGAAGGCC GAAGCCGAGG AAATCAGACA GCGGCTGGCG
GAGTTCCTGC GTGACGACCT CAAGTTGGAA CTGTCCGCCG ACAAGACGCT GATAACCCAC
GCCCGTACCG GCGCGGCCCG TTTCCTCGGC TACGAGATCA CTGTCCAGCA CAACAGCAGC
AAGACCACCC GGCGCCGTCG ATCGGTCAAC GGGCAGGTCG CGCTACGGGT GCCACGCGAT
GTGATCAAAG CTAAAAGTGT CCCCTACCTG CACCGCGGAA AACCCGCTAA GCAGAAGGCC
CTGACCAACG GTAACGACTA CACCATCGTC GCCACCTACG GGGCCATCTA CCGGGGCATC
GTCCAGTACT ACCTGCTGGC CGGAGACGTC CACCGACTTC ACCGGCTGCG CTGGGTCATG
GAGACATCCA TGCTCAAGAC CCTGGCAGGC AAGCACCGCT CGTCGGTGTC GAAGATGGCA
GCCAAACACA AGGCCAAAAT CCAGACACCG CACGGGCCAC GCACCTGCTT CGAGGCACGC
ATCGAACGCG ACAGCAGAAA ACCACTGGTC GCACGGTTCG GTGACATCCC ACTCCGCCGG
CAGAAAACAG CGACGGTCTC TGACCGTCAG CCGACCCGGG TGGACTATCC GCACAAGGAA
CTCCTCACCA GGCTCCTCGC GGATATCTGC GAAGTCTGCC AGCGCACGGG CAACGTTGAA
GTTCACCACG TCCGCGCGCT CAAAGACCTC GCGGCACCCG GCCCTCTGCC GCCCCCGTGG
GTCACAGCCA TGGCAAACCG CAGACGCAAG ACACTCGTGG TCTGCGCTAC CTGCCACGGC
CAGATCCACA AGGGGCGGCC CGCCACACCG CTCACGCAGT AG
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| Protein sequence | MQSAATVLGV LRERGKRGLP CDELYRQLFN PQMYLLAYGR IYTNHGAMTP GVTQETVDGM
SQERIGRIID AMRHERYRFH PVRRVHIPKK NGKTRPLGLP TWSDKLVGEV VRLLLEAYYE
PTFSDRSHGF RPRRGCHTAL REIANTWTGT AWFIEGDITD CFGSLNHDLM IGILSERVRD
NRFLRLVRNM LRAGYLEDWR WGATLSGAPQ GGVASPILSS IYLHKLDEFV EKILIPEYTR
GGRRARNPAY LVLQNELAKA RRRGDRGQAR ILRRRMVSLP SSDPDDPGYR RLRYCRYADD
HLLGFTGPKA EAEEIRQRLA EFLRDDLKLE LSADKTLITH ARTGAARFLG YEITVQHNSS
KTTRRRRSVN GQVALRVPRD VIKAKSVPYL HRGKPAKQKA LTNGNDYTIV ATYGAIYRGI
VQYYLLAGDV HRLHRLRWVM ETSMLKTLAG KHRSSVSKMA AKHKAKIQTP HGPRTCFEAR
IERDSRKPLV ARFGDIPLRR QKTATVSDRQ PTRVDYPHKE LLTRLLADIC EVCQRTGNVE
VHHVRALKDL AAPGPLPPPW VTAMANRRRK TLVVCATCHG QIHKGRPATP LTQ
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