Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4583 |
Symbol | |
ID | 5672930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5465574 |
End bp | 5466689 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641243446 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001508862 |
Protein GI | 158316354 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.277909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.943502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTCA GCTTCACCGC CGAGCACGAG CAGTTGCGGC GGGCCGTCCG CGATTTCCTG GCGGAGCGGT CGCCGGCGGC CGCCGTCCGG CGACTGATGG ACTCGACCGC CAACCGCGAC GACGACGTGT GGACCCGGCT GGCCGGGGAG CTCGGCCTGG TGGGCCTCGG CCTGCCCGAG CAGTACGGCG GCTCCGGCTT CGGCGAGATC GAGGTCGGGA TCGTGCTGGA GGAGATGGGC CGGGCGCTGC TCGTGGCCCC CTACCTGAGC ACCGCCGTGC TCGCGGGTCA GACCCTGGCG ACGTCCGAGG ACCGGGAGGC GCAGCAGCGG TGGCTGCCGG GGATCGCGGC CGGCTCGCTG ACCGCGACGC TGGCGGTCGC CGACGAGTCG GGATCGTGGG AGCTGACCGA CCCGGCGACG AGCGCCGAGC CGCGCGGCGG GCAGTGGCTG GTCTCCGGCC CGAACCACTA CGTCCTCGAC GGCCACAGCG CCGACCTGCT CCTGGTGGTG GCGCGGGCCG CGGACGGGAC GGGGGTGTTC GCGGTCGAGG GGACGGGCCC CGGGGCCGTG CGCGCCAGGC TCGACAGCCT CGACCCCACC CGGGACCTCG CCTCGGTCGT CCTACGGGAG GCGCCCGCGG TCCGGGTCGG CGCGGGCCGG GAGGCGACAA CGTGGCTGGG CGAGGTCCAC GACCGGGCAC TCGCGGCCCT GGCGTCGGAA CAGGTCGGCG GCGCGGCGCG GTGCCTGGAG CTCGCCGTCG ACTACGCGAA GGTACGGGAG CAGTTCGGCC GGCCGATCGG CTCGTTCCAG GCGATCAAGC ACAAGTGCGC CGCCCTGCTC GTCGAGGTCG AGAGCGCCCG CTCGGCGGTC TACCACGCCA ACGCCGCACT GGCCGCCGAC GACCCGGAGG GGACGGTCGC CGCGGCGGTC GCGTCGGCGT ACGCATCGCG GGCGTTCACC CTCGCCGCCA AGGAGTGCAT CCAGATCCAC GGCGGCATCG GGTTCACGTG GGAGCACGAC GCGCACCTCT TCCTGCGGCG GGCGAAGTCC TCCGAGCTGT TCTTCGGGGC ACCGCGGGCG CAGCGCAATC GGCTCGCGGA CCTGGTCGGG ATCTGA
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Protein sequence | MRLSFTAEHE QLRRAVRDFL AERSPAAAVR RLMDSTANRD DDVWTRLAGE LGLVGLGLPE QYGGSGFGEI EVGIVLEEMG RALLVAPYLS TAVLAGQTLA TSEDREAQQR WLPGIAAGSL TATLAVADES GSWELTDPAT SAEPRGGQWL VSGPNHYVLD GHSADLLLVV ARAADGTGVF AVEGTGPGAV RARLDSLDPT RDLASVVLRE APAVRVGAGR EATTWLGEVH DRALAALASE QVGGAARCLE LAVDYAKVRE QFGRPIGSFQ AIKHKCAALL VEVESARSAV YHANAALAAD DPEGTVAAAV ASAYASRAFT LAAKECIQIH GGIGFTWEHD AHLFLRRAKS SELFFGAPRA QRNRLADLVG I
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